RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FXYD2P54710 66 aa9.92□□□□□ -0.82
HMGCS1-201ENST00000325110 TRBV12-3P01733 135 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 EMP1P54849 157 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 LAGE3Q14657 143 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 SIRPDQ9H106 197 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 ATP5LO75964 103 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 FGF6P10767 208 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 ODF1Q14990 250 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 FBXL19-AS1Q494R0 122 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 SAMD5Q5TGI4 173 aa9.91□□□□□ -0.82
HMGCS1-201ENST00000325110 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 FAM74A4Q5TZK3 123 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 U3KQK5 164 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 WNK1Q9H4A3 2382 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 H3BRM9 83 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 HTN1P15515 57 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 CDKN1BP46527 198 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 C11orf71Q6IPW1 123 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 UNQ9165/PRO28630Q6UXU0 137 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 Q8N6K4 173 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 ZNF48Q96MX3 618 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 BSNQ9UPA5 3926 aa9.9□□□□□ -0.82
HMGCS1-201ENST00000325110 SONP18583 2426 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 UCNP55089 124 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 Q8N8P6 123 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 AGRNO00468 2067 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 OR11H12B2RN74 326 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 H3BUX3 64 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 ASIPP42127 132 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 OR11H1Q8NG94 326 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 OR11H2Q8NH07 326 aa9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 RPL39LQ96EH5 51 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-201ENST00000325110 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
HMGCS1-201ENST00000325110 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
HMGCS1-201ENST00000325110 SRSF1Q07955 248 aaKnown RBP eCLIP9.88□□□□□ -0.832e-7■■■■□ 22.5
HMGCS1-201ENST00000325110 C1orf122Q6ZSJ8 110 aa9.88□□□□□ -0.83
HMGCS1-201ENST00000325110 MOB4Q9Y3A3 225 aa9.88□□□□□ -0.83
HMGCS1-201ENST00000325110 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 PRR9Q5T870 116 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 GNRH2O43555 120 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 TMEM190Q8WZ59 177 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 DPF1Q92782 380 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 A0A1W2PPM0 123 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 ANXA2RQ3ZCQ2 193 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
HMGCS1-201ENST00000325110 K7EP34 96 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 GNLYP22749 145 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 EBI3Q14213 229 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 A0A087WWL8 130 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 BLCAPP62952 87 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 ADAMTSL5Q6ZMM2 481 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
HMGCS1-201ENST00000325110 LMO4P61968 165 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 CD300EQ496F6 205 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 NPFFR1Q9GZQ6 430 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 TMEM95Q3KNT9 176 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 IGHV4-38-2P0DP08 117 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 ATP5J2P56134 94 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 SUMO2P61956 95 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
HMGCS1-201ENST00000325110 C19orf84I3L1E1 186 aa9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 ABCA12Q86UK0 2595 aa9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 FAM159AQ6UWV7 190 aa9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 ZNF479Q96JC4 524 aa9.84□□□□□ -0.83
HMGCS1-201ENST00000325110 TRAV12-3A0A0B4J271 114 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 CD7P09564 240 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 TGFAP01135 160 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 ZNF688P0C7X2 276 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 CSTL1Q9H114 145 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 IGHV4-61A0A0C4DH41 118 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 RBAKDNA6NC62 111 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 DPH3P1Q9H4G8 78 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
HMGCS1-201ENST00000325110 APOMO95445 188 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms