RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SPANXN1Q5VSR9 72 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 GPHB5Q86YW7 130 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 C16orf92Q96LL3 132 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 BPESC1Q9GZL8 116 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 MOB4Q9Y3A3 225 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 SPCS1Q9Y6A9 102 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 SOCS3O14543 225 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 FABP2P12104 132 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 GCSHP23434 173 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 PLNP26678 52 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 COTL1Q14019 142 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 LINC00477Q96M19 166 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 UBTD1Q9HAC8 227 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 BRI3O95415 125 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 IGF1P05019 195 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 TAL2Q16559 108 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 TMEM219Q86XT9 240 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 CEND1Q8N111 149 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 MEGF9Q9H1U4 602 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 TMEM160Q9NX00 188 aa6.61□□□□□ -1.35
CLK1-201ENST00000321356 ITPR1Q14643 2758 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 G3V4G9 280 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 K7EMI3 77 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 NDUFA4O00483 81 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 SLC25A16P16260 332 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 ARL3P36405 182 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 MAPKAPK5-AS1Q8N8E1 139 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 RASL10AQ92737 203 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 FAM19A4Q96LR4 140 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 C20orf78Q9BR46 151 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 COL6A6A6NMZ7 2263 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 TRAV21A0A0B4J279 112 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 LINC01619G3V211 115 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.6□□□□□ -1.35
CLK1-201ENST00000321356 OVOL1O14753 267 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 SUMO2P61956 95 aaKnown RBP6.6□□□□□ -1.35
CLK1-201ENST00000321356 ORMDL2Q53FV1 153 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 UNQ9165/PRO28630Q6UXU0 137 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 CSTL1Q9H114 145 aa6.6□□□□□ -1.35
CLK1-201ENST00000321356 IGHV1-69DA0A0B4J2H0 117 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 TRBV7-9A0A0J9YWB2 115 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 F8VRH5 84 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 H7C1H1 209 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 K7ERJ3 54 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 M0R381 172 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 TRBV12-3P01733 135 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 IGHV1-69P01742 117 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 DPH3P1Q9H4G8 78 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 LINC00527Q9UJ94 153 aa6.59□□□□□ -1.35
CLK1-201ENST00000321356 AKAP6Q13023 2319 aa6.59□□□□□ -1.36
CLK1-201ENST00000321356 E9PLD3 99 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 H3BUA1 57 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 NXPH4O95158 308 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 ASIPP42127 132 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 NEXN-AS1Q8NBZ9 246 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 NHP2Q9NX24 153 aaKnown RBP6.58□□□□□ -1.36
CLK1-201ENST00000321356 SELENOKQ9Y6D0 94 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 AGRNO00468 2067 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 TRBV7-3A0A075B6L6 115 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 USMG5Q96IX5 58 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
CLK1-201ENST00000321356 CELSR1Q9NYQ6 3014 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 A0A1B0GWB2 263 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 IGLL5B9A064 214 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 IGHV4-39P01824 125 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 IGHG2P01859 326 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 DEFB1P60022 68 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 RPL39LQ96EH5 51 aaKnown RBP6.57□□□□□ -1.36
CLK1-201ENST00000321356 SPOCK3Q9BQ16 436 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
CLK1-201ENST00000321356 PHLDA3Q9Y5J5 127 aa6.57□□□□□ -1.36
CLK1-201ENST00000321356 IGHV3OR16-10A0A075B7F0 116 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 J3KRW8 73 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 RNASE3P12724 160 aaKnown RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 C14orf178Q8N769 122 aaPredicted RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 SPTAN1Q13813 2472 aaKnown RBP6.56□□□□□ -1.36
CLK1-201ENST00000321356 SPTBN4Q9H254 2564 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 CHD8Q9HCK8 2581 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 IGHV4OR15-8A0A075B7B6 117 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 A0A087WW49 117 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 OR11H12B2RN74 326 aa6.56□□□□□ -1.36
CLK1-201ENST00000321356 SPRY2O43597 315 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms