RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CCL25O15444 150 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 SLC25A29Q8N8R3 303 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 C5orf63A6NC05 138 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 LYPD2Q6UXB3 125 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
SMCHD1-201ENST00000320876 TEX36Q5VZQ5 186 aa13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 MBD3L4A6NDZ8 208 aaPredicted RBP13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 MBD3L3A6NE82 208 aaPredicted RBP13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 MBD3L5A6NJ08 208 aaPredicted RBP13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 MBD3L2Q8NHZ7 208 aaPredicted RBP13.46□□□□□ -0.25
SMCHD1-201ENST00000320876 LMO1P25800 156 aa13.46□□□□□ -0.26
SMCHD1-201ENST00000320876 NTN5Q8WTR8 489 aaPredicted RBP13.46□□□□□ -0.26
SMCHD1-201ENST00000320876 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.26
SMCHD1-201ENST00000320876 MUC4Q99102 2169 aa13.46□□□□□ -0.26
SMCHD1-201ENST00000320876 FOXI2Q6ZQN5 318 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 C5orf24Q7Z6I8 188 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 IGKV1-6A0A0C4DH72 117 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 IGLC7A0M8Q6 106 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 C22orf46C9J442 243 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 FOXL2NBQ6ZUU3 175 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 RNF144BQ7Z419 303 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 SMIM20Q8N5G0 67 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 MP68P56378 58 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 C11orf52Q96A22 123 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 RBAKDNA6NC62 111 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 DEFB125Q8N687 156 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
SMCHD1-201ENST00000320876 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 Q6ZVH6 145 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 WFDC9Q8NEX5 89 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 CLPSL1A2RUU4 121 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 SPATA25Q9BR10 227 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 TRAV12-2A0A075B6T6 113 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 IGHV3-38A0A0C4DH36 116 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 Q8TCH9 128 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 IGFBPL1Q8WX77 278 aa13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 MRPL53Q96EL3 112 aaKnown RBP13.44□□□□□ -0.26
SMCHD1-201ENST00000320876 FAM236AA0A1B0GUQ0 79 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 FAM236BA0A1B0GV22 79 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 CSRP1P21291 193 aaKnown RBP13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 ICOSQ9Y6W8 199 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 MDS2Q8NDY4 140 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 A0A1B0GX51 115 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 VOPP1Q96AW1 172 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 CGB3P0DN86 165 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 VWCEQ96DN2 955 aa13.43□□□□□ -0.26
SMCHD1-201ENST00000320876 A0A0B4J2C4 111 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 TEN1Q86WV5 123 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 Q9H8V8 135 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 Q0VFX4 171 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 B3GALT5-AS1P59052 145 aa13.42□□□□□ -0.26
SMCHD1-201ENST00000320876 RS1O15537 224 aa13.41□□□□□ -0.26
SMCHD1-201ENST00000320876 COL8A2P25067 703 aa13.41□□□□□ -0.26
SMCHD1-201ENST00000320876 K7EN84 100 aa13.41□□□□□ -0.26
SMCHD1-201ENST00000320876 LY6DQ14210 128 aa13.41□□□□□ -0.26
SMCHD1-201ENST00000320876 K7EM74 188 aa13.41□□□□□ -0.26
SMCHD1-201ENST00000320876 TEX48A0A1B0GUV7 120 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 RNASE13Q5GAN3 156 aaKnown RBP13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 ZNF747Q9BV97 191 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 H0YGX0 51 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 XCL1P47992 114 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 PCP2Q8IVA1 136 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.26
SMCHD1-201ENST00000320876 IGKV1-39P01597 117 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 IGKV1D-39P04432 117 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 CGB7P0DN87 165 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 MSMBP08118 114 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 PSMB8P28062 276 aa13.39□□□□□ -0.27
SMCHD1-201ENST00000320876 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 DEFB105AQ8NG35 78 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 LHBP01229 141 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 PRDM6Q9NQX0 595 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 IGHV7-4-1A0A0J9YVY3 117 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 DYNAPQ8N1N2 210 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 LINC00311Q8N616 119 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 LYPD6BQ8NI32 183 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 IGF2BP2-AS1Q96M15 143 aa13.38□□□□□ -0.27
SMCHD1-201ENST00000320876 RNF152Q8N8N0 203 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 WT1-ASQ06250 92 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 UBE2BP63146 152 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 C17orf58Q2M2W7 97 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 IGHV1-69DA0A0B4J2H0 117 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 IGHV1-69P01742 117 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 E9PQ18 207 aa13.37□□□□□ -0.27
SMCHD1-201ENST00000320876 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
SMCHD1-201ENST00000320876 ATP5G1P05496 136 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms