RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NCOR1P1Q9H4R4 102 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 YPEL4Q96NS1 127 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 ZNF492Q9P255 531 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 CEP192Q8TEP8 1941 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 ZFP36P26651 326 aaKnown RBP12.93□□□□□ -0.34
CLIP4-201ENST00000320081 COA6Q5JTJ3 125 aaKnown RBP12.93□□□□□ -0.34
CLIP4-201ENST00000320081 TRGV4A0A0C4DH28 118 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 SEC11AP67812 179 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
CLIP4-201ENST00000320081 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
CLIP4-201ENST00000320081 KIR2DL5BA0A0G2JN68 375 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 KIR2DL5BA0A0G2JPC4 375 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 AMTNQ6UX39 209 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 KIR2DL5AQ8N109 375 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 GP9P14770 177 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
CLIP4-201ENST00000320081 GTSF1LQ9H1H1 148 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV7-81A0A0B4J1V7 117 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
CLIP4-201ENST00000320081 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 I3L2K1 104 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 LTAP01374 205 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 CFHR4Q92496 578 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 SPOCK3Q9BQ16 436 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 PEMTQ9UBM1 199 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
CLIP4-201ENST00000320081 TEX43Q6ZNM6 134 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
CLIP4-201ENST00000320081 CTSGP08311 255 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
CLIP4-201ENST00000320081 CCL25O15444 150 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 IGLV1-47P01700 117 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 P0C879 139 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 SLC25A16P16260 332 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 Q8N7P7 452 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 DNAL4O96015 105 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 ADORA2A-AS1P86434 159 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
CLIP4-201ENST00000320081 IGLV2-23P01705 113 aa12.89□□□□□ -0.35
CLIP4-201ENST00000320081 GAGE1Q13065 139 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 SDHAF1A6NFY7 115 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
CLIP4-201ENST00000320081 NBL1P41271 181 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 CT83Q5H943 113 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
CLIP4-201ENST00000320081 MUC22E2RYF6 1773 aaPredicted RBP12.87□□□□□ -0.35
CLIP4-201ENST00000320081 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 VCYO14598 125 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
CLIP4-201ENST00000320081 CGB3P0DN86 165 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 CGB7P0DN87 165 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 ESDP10768 282 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 ZNF747Q9BV97 191 aa12.87□□□□□ -0.35
CLIP4-201ENST00000320081 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
CLIP4-201ENST00000320081 TMEM14CQ9P0S9 112 aa12.86□□□□□ -0.35
CLIP4-201ENST00000320081 IGKV1D-37A0A075B6S9 117 aa12.86□□□□□ -0.35
CLIP4-201ENST00000320081 CENPVL3A0A0U1RRI6 287 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 PAX2Q02962 417 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 TTC32Q5I0X7 151 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 RPL39LQ96EH5 51 aaKnown RBP12.85□□□□□ -0.35
CLIP4-201ENST00000320081 SRSF8Q9BRL6 282 aaKnown RBP12.85□□□□□ -0.35
CLIP4-201ENST00000320081 TRANK1O15050 2925 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 CR1LQ2VPA4 569 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 REV3LO60673 3130 aa12.85□□□□□ -0.35
CLIP4-201ENST00000320081 TRGV11A0A075B6L2 103 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 CD5LO43866 347 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 Q96MF0 132 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 ZNF415Q09FC8 603 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 MYO15AQ9UKN7 3530 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 PLNP26678 52 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
CLIP4-201ENST00000320081 Q8N9W7 124 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 CST9LQ9H4G1 147 aa12.84□□□□□ -0.35
CLIP4-201ENST00000320081 ATRQ13535 2644 aa12.83□□□□□ -0.35
CLIP4-201ENST00000320081 H3BRM9 83 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms