RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 GCGP01275 180 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 TYMSP04818 313 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 SFTA3P0C7M3 94 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 KCNRGQ8N5I3 272 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
HDDC2-201ENST00000318787 A0A096LPF7 62 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 A0A1B0GV50 99 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 A0A1W2PRE2 83 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 RTL8CO15255 209 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 C1orf134Q5TEV5 83 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 Q6ZR54 194 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 OR11H4Q8NGC9 324 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 SPXQ9BT56 116 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 DNAH2Q9P225 4427 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 PFDN1O60925 122 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 FHITP49789 147 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
HDDC2-201ENST00000318787 ZNF345Q14585 488 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 ESRGQ1W209 222 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 SMUG1Q53HV7 270 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 TMEM75Q8N9X5 138 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 STOML3Q8TAV4 291 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 ICOSQ9Y6W8 199 aa11.16□□□□□ -0.62
HDDC2-201ENST00000318787 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
HDDC2-201ENST00000318787 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 A0A0D9SG52 128 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 C9JCJ5 164 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 H3BNG1 76 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 PEX7O00628 323 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 PPT1P50897 306 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 TDRG1Q3Y452 100 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 CST9LP1Q5W188 147 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 FAM213BQ8TBF2 198 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 ZNF479Q96JC4 524 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 Q9H8V8 135 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 PRO0255Q9UI72 69 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.63
HDDC2-201ENST00000318787 FAM74A7A6NL05 159 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 HMSDA8MTL9 139 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 M0R2P5 195 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 BCL2L11O43521 198 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
HDDC2-201ENST00000318787 FAT2Q9NYQ8 4349 aa11.13□□□□□ -0.63
HDDC2-201ENST00000318787 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
HDDC2-201ENST00000318787 CRYBA4P53673 196 aa11.13□□□□□ -0.63
HDDC2-201ENST00000318787 FHL2Q14192 279 aa11.13□□□□□ -0.63
HDDC2-201ENST00000318787 SAPCD1Q5SSQ6 148 aa11.13□□□□□ -0.63
HDDC2-201ENST00000318787 OR4C5Q8NGB2 326 aa11.13□□□□□ -0.63
HDDC2-201ENST00000318787 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
HDDC2-201ENST00000318787 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
HDDC2-201ENST00000318787 UBE2G1P62253 170 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 SLAQ13239 276 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 Q86TA4 180 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 SFT2D1Q8WV19 159 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 PCNPQ8WW12 178 aaKnown RBP11.12□□□□□ -0.63
HDDC2-201ENST00000318787 RASL10AQ92737 203 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 NKX6-2Q9C056 277 aaPredicted RBP11.12□□□□□ -0.63
HDDC2-201ENST00000318787 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
HDDC2-201ENST00000318787 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
HDDC2-201ENST00000318787 TRAV4A0A0B4J268 109 aa11.11□□□□□ -0.63
HDDC2-201ENST00000318787 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
HDDC2-201ENST00000318787 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
HDDC2-201ENST00000318787 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
HDDC2-201ENST00000318787 PAGE4O60829 102 aa11.1□□□□□ -0.63
HDDC2-201ENST00000318787 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
HDDC2-201ENST00000318787 SRIP30626 198 aa11.1□□□□□ -0.63
HDDC2-201ENST00000318787 EIF5AP63241 154 aaKnown RBP11.1□□□□□ -0.63
HDDC2-201ENST00000318787 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
HDDC2-201ENST00000318787 C6orf223Q8N319 242 aa11.1□□□□□ -0.63
HDDC2-201ENST00000318787 HIST1H2BAQ96A08 127 aa11.1□□□□□ -0.63
HDDC2-201ENST00000318787 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
HDDC2-201ENST00000318787 GYPEP15421 78 aa11.09□□□□□ -0.63
HDDC2-201ENST00000318787 MRPL23Q16540 153 aaKnown RBP11.09□□□□□ -0.63
HDDC2-201ENST00000318787 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 M0R036 132 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 ORM1P02763 201 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 TPT1P13693 172 aaKnown RBP11.08□□□□□ -0.64
HDDC2-201ENST00000318787 AKR1C3P42330 323 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 UPK3BQ9BT76 320 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 HERC2O95714 4834 aa11.08□□□□□ -0.64
HDDC2-201ENST00000318787 hCG_2014768A0A024R1R8 64 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 A0A1B0GVY2 172 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 K7EQD1 137 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 NXPH4O95158 308 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 FMC1Q96HJ9 113 aa11.07□□□□□ -0.64
HDDC2-201ENST00000318787 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 B4DEV8 164 aa11.06□□□□□ -0.64
HDDC2-201ENST00000318787 SIVA1O15304 175 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms