RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
SERF1A-201ENST00000317633 SSNA1O43805 119 aa13.6□□□□□ -0.23
SERF1A-201ENST00000317633 ACOT6Q3I5F7 207 aaPredicted RBP13.6□□□□□ -0.23
SERF1A-201ENST00000317633 KCNS1Q96KK3 526 aa13.6□□□□□ -0.23
SERF1A-201ENST00000317633 SMIM3Q9BZL3 60 aa13.6□□□□□ -0.23
SERF1A-201ENST00000317633 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 GNRH2O43555 120 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 CRYGDP07320 174 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 XGP55808 180 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 MARVELD1Q9BSK0 173 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 SDF2L1Q9HCN8 221 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
SERF1A-201ENST00000317633 NHLRC2Q8NBF2 726 aa13.58□□□□□ -0.24
SERF1A-201ENST00000317633 FRZBQ92765 325 aa13.58□□□□□ -0.24
SERF1A-201ENST00000317633 TYMSP04818 313 aa13.57□□□□□ -0.24
SERF1A-201ENST00000317633 TIRAPP58753 221 aa13.57□□□□□ -0.24
SERF1A-201ENST00000317633 PSCAO43653 123 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 INAFM2P0DMQ5 153 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 GCSHP23434 173 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 PPT1P50897 306 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 KRTAP10-1P60331 282 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 NDFIP1Q9BT67 221 aa13.56□□□□□ -0.24
SERF1A-201ENST00000317633 IGHV3-38A0A0C4DH36 116 aa13.55□□□□□ -0.24
SERF1A-201ENST00000317633 FBLL1A6NHQ2 334 aaKnown RBP13.55□□□□□ -0.24
SERF1A-201ENST00000317633 F6UZH7 168 aa13.55□□□□□ -0.24
SERF1A-201ENST00000317633 CIDEAO60543 219 aa13.55□□□□□ -0.24
SERF1A-201ENST00000317633 EIF3GO75821 320 aaKnown RBP eCLIP13.55□□□□□ -0.24
SERF1A-201ENST00000317633 PFN1P07737 140 aaKnown RBP13.55□□□□□ -0.24
SERF1A-201ENST00000317633 GATA1P15976 413 aaPredicted RBP13.55□□□□□ -0.24
SERF1A-201ENST00000317633 IFITM3Q01628 133 aa13.55□□□□□ -0.24
SERF1A-201ENST00000317633 TRAV8-1A0A0A6YYK1 113 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 LOC100131303A0A0U1RQF7 123 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 SERTM2A0A1B0GWG4 89 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 DEFA1P59665 94 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 DEFA3P59666 94 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 Q5VSD8 79 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 TVP23CQ96ET8 276 aa13.54□□□□□ -0.24
SERF1A-201ENST00000317633 RAB2AP61019 212 aa13.53□□□□□ -0.24
SERF1A-201ENST00000317633 PRADC1Q9BSG0 188 aa13.53□□□□□ -0.24
SERF1A-201ENST00000317633 WFDC1Q9HC57 220 aa13.53□□□□□ -0.24
SERF1A-201ENST00000317633 K7EQM0 130 aa13.52□□□□□ -0.25
SERF1A-201ENST00000317633 GNG5P63218 68 aa13.52□□□□□ -0.25
SERF1A-201ENST00000317633 ZNF876PQ49A33 203 aa13.52□□□□□ -0.25
SERF1A-201ENST00000317633 LINC01556Q5JQF7 62 aa13.52□□□□□ -0.25
SERF1A-201ENST00000317633 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
SERF1A-201ENST00000317633 RHOHQ15669 191 aa13.51□□□□□ -0.25
SERF1A-201ENST00000317633 OR10J3Q5JRS4 329 aa13.51□□□□□ -0.25
SERF1A-201ENST00000317633 SLC25A29Q8N8R3 303 aa13.51□□□□□ -0.25
SERF1A-201ENST00000317633 NTN5Q8WTR8 489 aaPredicted RBP13.51□□□□□ -0.25
SERF1A-201ENST00000317633 IGLV5-52A0A0A0MRZ9 124 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 TRBV6-4A0A1B0GX49 114 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 IBA57-AS1B1ANH7 110 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 TAAR5O14804 337 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 ARL14EPLP0DKL9 152 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
SERF1A-201ENST00000317633 C5orf17Q8NAS9 161 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 SGK494Q96LW2 274 aa13.5□□□□□ -0.25
SERF1A-201ENST00000317633 RS1O15537 224 aa13.49□□□□□ -0.25
SERF1A-201ENST00000317633 TCRAP04437 139 aa13.49□□□□□ -0.25
SERF1A-201ENST00000317633 ZFP69Q49AA0 526 aa13.49□□□□□ -0.25
SERF1A-201ENST00000317633 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
SERF1A-201ENST00000317633 STAG3L2P0CL84 134 aa13.48□□□□□ -0.25
SERF1A-201ENST00000317633 STAG3L3P0CL85 134 aa13.48□□□□□ -0.25
SERF1A-201ENST00000317633 LRCOL1A6NCL2 159 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 FAM229AH3BQW9 127 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 GCGP01275 180 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 LELP1Q5T871 98 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 OR2G3Q8NGZ4 309 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 SH3BGRL3Q9H299 93 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 PSG8Q9UQ74 426 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 VPS13BQ7Z7G8 4022 aa13.47□□□□□ -0.25
SERF1A-201ENST00000317633 SMR3BP02814 79 aaPredicted RBP13.46□□□□□ -0.25
SERF1A-201ENST00000317633 MGST1P10620 155 aaKnown RBP13.46□□□□□ -0.25
SERF1A-201ENST00000317633 ZNF80P51504 273 aaPredicted RBP13.46□□□□□ -0.25
SERF1A-201ENST00000317633 FLI1Q01543 452 aaPredicted RBP13.46□□□□□ -0.25
SERF1A-201ENST00000317633 SMUG1Q53HV7 270 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 RAB24Q969Q5 203 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 PTH2Q96A98 100 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 PSMG3Q9BT73 122 aaPredicted RBP13.46□□□□□ -0.25
SERF1A-201ENST00000317633 TMEM70Q9BUB7 260 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 GTSF1LQ9H1H1 148 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 Q9HAA7 133 aa13.46□□□□□ -0.25
SERF1A-201ENST00000317633 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 MBP02144 154 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 GCHFRP30047 84 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 Q8N814 137 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 HSD17B11Q8NBQ5 300 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 ATP6V0E2Q8NHE4 81 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 SUN5Q8TC36 379 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
SERF1A-201ENST00000317633 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
SERF1A-201ENST00000317633 IGHV3-33P01772 117 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms