RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 M0R3E3 92 aa7.13□□□□□ -1.27
BDNF-201ENST00000314915 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
BDNF-201ENST00000314915 SS18L1O75177 396 aaPredicted RBP7.12□□□□□ -1.27
BDNF-201ENST00000314915 SNRPD3P62318 126 aaKnown RBP7.12□□□□□ -1.27
BDNF-201ENST00000314915 KLHL30-AS1Q8NEE0 82 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 CENPFP49454 3210 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 PAX4O43316 350 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 SPINK2P20155 84 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 XCL1P47992 114 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
BDNF-201ENST00000314915 DAZ3Q9NR90 486 aaKnown RBP7.12□□□□□ -1.27
BDNF-201ENST00000314915 XCL2Q9UBD3 114 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 MED12Q93074 2177 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 TMEM30CPA0ZSE6 113 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 CFHR3Q02985 330 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 FANCD2OSQ96PS1 177 aa7.12□□□□□ -1.27
BDNF-201ENST00000314915 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 RP1P56715 2156 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 IGLV2-18A0A075B6J9 118 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 TRAV8-3A0A0A6YYJ7 113 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 TEX22C9J3V5 150 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 NGFP01138 241 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
BDNF-201ENST00000314915 GFRALQ6UXV0 394 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 DNAH12Q6ZR08 3092 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 PRSS2P07478 247 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 DYNAPQ8N1N2 210 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 FAM216BQ8N7L0 139 aa7.11□□□□□ -1.27
BDNF-201ENST00000314915 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
BDNF-201ENST00000314915 Q8IYB0 196 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 CCKP06307 115 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 LOXP28300 417 aaPredicted RBP7.1□□□□□ -1.27
BDNF-201ENST00000314915 SAA4P35542 130 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 PLGLAQ15195 96 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 PATE2Q6UY27 113 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 Q6ZS46 218 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 WNT9BO14905 357 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 IGLV2-11P01706 119 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 HES7Q9BYE0 225 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 Q9UF83 564 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 MOB4Q9Y3A3 225 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 SPRY2O43597 315 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 FOXF2Q12947 444 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 DEFB118Q96PH6 123 aa7.1□□□□□ -1.27
BDNF-201ENST00000314915 TRAV3A0A0B4J244 114 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 FAM223BA6NKX1 122 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 EFNA2O43921 213 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 VKORC1L1Q8N0U8 176 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 DEFB126Q9BYW3 111 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 H7BZZ5 65 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 DOCK7Q96N67 2140 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 C12orf77C9JDV5 145 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 FSTL3O95633 263 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 GHRHP01286 108 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 MRPL53Q96EL3 112 aaKnown RBP7.09□□□□□ -1.27
BDNF-201ENST00000314915 F5P12259 2224 aa7.09□□□□□ -1.27
BDNF-201ENST00000314915 KNTC1P50748 2209 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 NDUFC1O43677 76 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 SS18Q15532 418 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 INTS1Q8N201 2190 aaKnown RBP7.08□□□□□ -1.28
BDNF-201ENST00000314915 IGHV5-51A0A0C4DH38 117 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 BCE1O60756 84 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 CIRBPQ14011 172 aaKnown RBP7.08□□□□□ -1.28
BDNF-201ENST00000314915 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 PMS2CLQ68D20 193 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 RNASE6Q93091 150 aaKnown RBP7.08□□□□□ -1.28
BDNF-201ENST00000314915 UBE2E1P51965 193 aa7.08□□□□□ -1.28
BDNF-201ENST00000314915 TRIOBPQ9H2D6 2365 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 TRBV19A0A075B6N1 114 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 IGHV1OR15-9A0A0B4J2B8 117 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 ZNF71Q9NQZ8 489 aaPredicted RBP7.07□□□□□ -1.28
BDNF-201ENST00000314915 IGHV3-9P01782 118 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 CLEC2BQ92478 149 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
BDNF-201ENST00000314915 LRP4O75096 1905 aa7.07□□□□□ -1.28
BDNF-201ENST00000314915 IGKV3D-11A0A0A0MRZ8 115 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 IGHV1-58A0A0C4DH39 117 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 J3QT63 122 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 DNAL4O96015 105 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 GP9P14770 177 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 HOXA4Q00056 320 aaPredicted RBP7.06□□□□□ -1.28
BDNF-201ENST00000314915 FAM222AQ5U5X8 452 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 CNFNQ9BYD5 112 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
BDNF-201ENST00000314915 IGHV3-64DA0A0J9YX35 117 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 C11orf86A6NJI1 115 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 ZNHIT1O43257 154 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 GATA1P15976 413 aaPredicted RBP7.06□□□□□ -1.28
BDNF-201ENST00000314915 CRIP1P50238 77 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 THAP8Q8NA92 274 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 NFAM1Q8NET5 270 aaPredicted RBP7.06□□□□□ -1.28
BDNF-201ENST00000314915 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 UBE2D4Q9Y2X8 147 aa7.06□□□□□ -1.28
BDNF-201ENST00000314915 FGF23Q9GZV9 251 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms