RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 TMEM218A2RU14 115 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 B4DEV8 164 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 ADIRFQ15847 76 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 Q8NAQ8 132 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
TUBA3E-201ENST00000312988 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
TUBA3E-201ENST00000312988 F8W036 122 aa11.33□□□□□ -0.6
TUBA3E-201ENST00000312988 U3KQK5 164 aa11.33□□□□□ -0.6
TUBA3E-201ENST00000312988 A0A0J9YWU9 116 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 TMEM189A5PLL7 270 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 GNRH2O43555 120 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 P01737 135 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
TUBA3E-201ENST00000312988 TENM3Q9P273 2699 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 IGKV3D-20A0A0C4DH25 116 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 KRBOX1C9JBD0 128 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 TYMSP04818 313 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 ERVFC1-1P60608 527 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
TUBA3E-201ENST00000312988 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 ASIPP42127 132 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 MDFICQ9P1T7 246 aa11.3□□□□□ -0.6
TUBA3E-201ENST00000312988 DNAH9Q9NYC9 4486 aa11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 ADCYAP1P18509 176 aa11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 SLC7A5P1Q8MH63 180 aa11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
TUBA3E-201ENST00000312988 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 TCL1AP56279 114 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
TUBA3E-201ENST00000312988 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.61
TUBA3E-201ENST00000312988 PNRC1Q12796 327 aaPredicted RBP11.27□□□□□ -0.61
TUBA3E-201ENST00000312988 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
TUBA3E-201ENST00000312988 H3BVH4 76 aa11.26□□□□□ -0.61
TUBA3E-201ENST00000312988 SPART-AS1P0CW21 52 aa11.26□□□□□ -0.61
TUBA3E-201ENST00000312988 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
TUBA3E-201ENST00000312988 OR10G8Q8NGN5 311 aa11.26□□□□□ -0.61
TUBA3E-201ENST00000312988 OSTCQ9NRP0 149 aa11.26□□□□□ -0.61
TUBA3E-201ENST00000312988 CXorf65A6NEN9 183 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 GZMBP10144 247 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 SPXQ9BT56 116 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 HUWE1Q7Z6Z7 4374 aaKnown RBP11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 TEX48A0A1B0GUV7 120 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 LYRM9A8MSI8 78 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 CXCL1P09341 107 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 ARMS2P0C7Q2 107 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 MRPL16Q9NX20 251 aaKnown RBP11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
TUBA3E-201ENST00000312988 DNLZQ5SXM8 178 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 C11orf45Q8TAV5 145 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 IL36BQ9NZH7 164 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 COL7A1Q02388 2944 aa11.24□□□□□ -0.61
TUBA3E-201ENST00000312988 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 A8MWL6 223 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 M0R2P5 195 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 GAGE7O76087 117 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 DAD1P61803 113 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 Q6ZTI0 123 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 CARHSP1Q9Y2V2 147 aaKnown RBP11.23□□□□□ -0.61
TUBA3E-201ENST00000312988 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms