RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 A6NJY4 79 aa13.99□□□□□ -0.17
SPSB4-201ENST00000310546 VKORC1Q9BQB6 163 aa13.99□□□□□ -0.17
SPSB4-201ENST00000310546 HRNRQ86YZ3 2850 aaPredicted RBP13.99□□□□□ -0.17
SPSB4-201ENST00000310546 TNFRSF13BO14836 293 aaPredicted RBP13.98□□□□□ -0.17
SPSB4-201ENST00000310546 TRGV3P03979 118 aa13.98□□□□□ -0.17
SPSB4-201ENST00000310546 SMIM20Q8N5G0 67 aa13.98□□□□□ -0.17
SPSB4-201ENST00000310546 IGLV3-9A0A075B6K5 115 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 TRBV7-9A0A0J9YWB2 115 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 A8MWV9 139 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 F8VRH5 84 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 NHLRC4P0CG21 123 aaPredicted RBP13.97□□□□□ -0.17
SPSB4-201ENST00000310546 HLA-DMBP28068 263 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 FAM208BQ5VWN6 2430 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 ZNF815PA8K554 130 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 H7C1H1 209 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 TCL1BO95988 128 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 GRNP28799 593 aaKnown RBP13.97□□□□□ -0.17
SPSB4-201ENST00000310546 PRTN3P24158 256 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 ANKRD29Q8N6D5 301 aa13.97□□□□□ -0.17
SPSB4-201ENST00000310546 K7EIM0 57 aa13.96□□□□□ -0.17
SPSB4-201ENST00000310546 PDE6HQ13956 83 aa13.96□□□□□ -0.17
SPSB4-201ENST00000310546 TEX36Q5VZQ5 186 aa13.96□□□□□ -0.17
SPSB4-201ENST00000310546 CSMD2Q7Z408 3487 aa13.96□□□□□ -0.18
SPSB4-201ENST00000310546 PRADC1Q9BSG0 188 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 SCGB1C2P0DMR2 95 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 UBE2D3P61077 147 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 UBE2D2P62837 147 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 LYPD2Q6UXB3 125 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 PLEKHB2Q96CS7 222 aa13.95□□□□□ -0.18
SPSB4-201ENST00000310546 FABP5P3A8MUU1 101 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 CDSNQ15517 529 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 CNFNQ9BYD5 112 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 VCX2Q9H322 139 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 CD40P25942 277 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE2BQ13066 116 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 ERCC8Q13216 396 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE2EQ4V326 116 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 LINC01560Q8TB33 94 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 CCL17Q92583 94 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE2DQ9UEU5 116 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 CCDC179H3BU77 68 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 UBE2D1P51668 147 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 LINC00311Q8N616 119 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 KLHL30-AS1Q8NEE0 82 aa13.94□□□□□ -0.18
SPSB4-201ENST00000310546 IGHV3OR16-8A0A075B7F1 116 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 TMEM262E9PQX1 116 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 CRYGBP07316 175 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 TMEM190Q8WZ59 177 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 TRAV8-2A0A0B4J237 113 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 LINC01619G3V211 115 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 NDUFB3O43676 98 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 SLC25A16P16260 332 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 UCNP55089 124 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 LYRM7Q5U5X0 104 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 SCGB3A1Q96QR1 104 aa13.93□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE12JA6NER3 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE7O76087 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE12FP0CL80 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE12GP0CL81 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE12IP0CL82 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 NDUFV3P56181 108 aaKnown RBP13.92□□□□□ -0.18
SPSB4-201ENST00000310546 RPL32P62910 135 aaKnown RBP13.92□□□□□ -0.18
SPSB4-201ENST00000310546 GAGE4Q13068 117 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
SPSB4-201ENST00000310546 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 SNCGO76070 127 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 NRACQ8N912 160 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 CITED1Q99966 193 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 CELSR1Q9NYQ6 3014 aa13.92□□□□□ -0.18
SPSB4-201ENST00000310546 TRAV4A0A0B4J268 109 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 COX8CQ7Z4L0 72 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 LRRK2Q5S007 2527 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 IGHV1-8P0DP01 117 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 TTC32Q5I0X7 151 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 BSPH1Q075Z2 132 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 NDUFA11Q86Y39 141 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 CFHR4Q92496 578 aa13.91□□□□□ -0.18
SPSB4-201ENST00000310546 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 RHODO00212 210 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 CD7P09564 240 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 OR11H6Q8NGC7 330 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 CCL21O00585 134 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 CRLF1O75462 422 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 IGHV3-23P01764 117 aa13.9□□□□□ -0.18
SPSB4-201ENST00000310546 SRD5A1P18405 259 aa13.89□□□□□ -0.19
SPSB4-201ENST00000310546 IGHV1-3A0A0C4DH29 117 aa13.89□□□□□ -0.19
SPSB4-201ENST00000310546 IGHV3-35A0A0C4DH35 117 aa13.89□□□□□ -0.19
SPSB4-201ENST00000310546 DYNAPQ8N1N2 210 aa13.89□□□□□ -0.19
SPSB4-201ENST00000310546 TRAV12-1A0A0B4J245 112 aa13.88□□□□□ -0.19
SPSB4-201ENST00000310546 RPL7P18124 248 aaKnown RBP13.88□□□□□ -0.19
SPSB4-201ENST00000310546 IL17RELQ6ZVW7 336 aa13.88□□□□□ -0.19
SPSB4-201ENST00000310546 POLQO75417 2590 aa13.88□□□□□ -0.19
SPSB4-201ENST00000310546 FAM110AQ9BQ89 295 aa13.88□□□□□ -0.19
SPSB4-201ENST00000310546 ONECUT1Q9UBC0 465 aa13.88□□□□□ -0.19
SPSB4-201ENST00000310546 IGKV3D-20A0A0C4DH25 116 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 C9JAW5 83 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 IGHG4P01861 327 aa13.87□□□□□ -0.19
SPSB4-201ENST00000310546 LOXP28300 417 aaPredicted RBP13.87□□□□□ -0.19
SPSB4-201ENST00000310546 C8orf31Q8N9H6 132 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms