RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
PTPN7-201ENST00000309017 RAXQ9Y2V3 346 aa8.64□□□□□ -1.03
PTPN7-201ENST00000309017 SPRY2O43597 315 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 APOMO95445 188 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 PLNP26678 52 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 CHTOPQ9Y3Y2 248 aaKnown RBP8.63□□□□□ -1.03
PTPN7-201ENST00000309017 NDUFS8O00217 210 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 CLEC19AQ6UXS0 136 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 ZNF418Q8TF45 676 aaPredicted RBP8.63□□□□□ -1.03
PTPN7-201ENST00000309017 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
PTPN7-201ENST00000309017 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 A0A087WX48 190 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 HOXA3O43365 443 aaPredicted RBP8.63□□□□□ -1.03
PTPN7-201ENST00000309017 ZMAT4Q9H898 229 aa8.63□□□□□ -1.03
PTPN7-201ENST00000309017 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 PIFOQ8TCI5 191 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 HECTD1Q9ULT8 2610 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 IGKV3D-20A0A0C4DH25 116 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 LY6LH3BQJ8 138 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 H7C1H1 209 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
PTPN7-201ENST00000309017 PSMB2P49721 201 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 PIP4P1Q86T03 277 aa8.62□□□□□ -1.03
PTPN7-201ENST00000309017 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
PTPN7-201ENST00000309017 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 C16orf92Q96LL3 132 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 F8VRH5 84 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 INSL3P51460 131 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 CKS1BP61024 79 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
PTPN7-201ENST00000309017 NPBQ8NG41 125 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 TGFAP01135 160 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 TAL2Q16559 108 aa8.61□□□□□ -1.03
PTPN7-201ENST00000309017 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 A6NJY4 79 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 IGHG4P01861 327 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
PTPN7-201ENST00000309017 METTL26Q96S19 204 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 IGKV3-7A0A075B6H7 116 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 RAB9AP51151 201 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 CNFNQ9BYD5 112 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
PTPN7-201ENST00000309017 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 Q6ZQT7 251 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 COX8CQ7Z4L0 72 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 SCGB1C2P0DMR2 95 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 SCGB1A1P11684 91 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 EMP1P54849 157 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 ORMDL2Q53FV1 153 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
PTPN7-201ENST00000309017 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-201ENST00000309017 BUB3O43684 328 aa8.59□□□□□ -1.04
PTPN7-201ENST00000309017 ZNF48Q96MX3 618 aaPredicted RBP8.59□□□□□ -1.04
PTPN7-201ENST00000309017 C20orf78Q9BR46 151 aa8.59□□□□□ -1.04
PTPN7-201ENST00000309017 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.04
PTPN7-201ENST00000309017 SYT8Q8NBV8 401 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 OR11H6Q8NGC7 330 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 PRTN3P24158 256 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 SRSF2Q01130 221 aaKnown RBP8.58□□□□□ -1.04
PTPN7-201ENST00000309017 HLA-DRB4P13762 266 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
PTPN7-201ENST00000309017 NRACQ8N912 160 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
PTPN7-201ENST00000309017 HLA-DRB4X5D2U9 266 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 LRBAP50851 2863 aa8.58□□□□□ -1.04
PTPN7-201ENST00000309017 IGLV2-18A0A075B6J9 118 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 SLC25A16P16260 332 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 G3V318 75 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
PTPN7-201ENST00000309017 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
PTPN7-201ENST00000309017 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
PTPN7-201ENST00000309017 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
PTPN7-201ENST00000309017 GLMPQ8WWB7 406 aa8.56□□□□□ -1.04
PTPN7-201ENST00000309017 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
PTPN7-201ENST00000309017 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
PTPN7-201ENST00000309017 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
PTPN7-201ENST00000309017 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
PTPN7-201ENST00000309017 TRBV7-3A0A075B6L6 115 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 IGHV7-4-1A0A0J9YVY3 117 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 RBAKDNA6NC62 111 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 F5H697 171 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 M0R1W7 72 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 HERVK_113P61574 105 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 LYRM7Q5U5X0 104 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 EEF1AKMT3Q96AZ1 226 aa8.55□□□□□ -1.04
PTPN7-201ENST00000309017 CELSR1Q9NYQ6 3014 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms