RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 SYS1-DBNDD2H3BUS1 97 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 LGALS9O00182 355 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 NCR2O95944 276 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 PPBPP02775 128 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 HIST2H2BCQ6DN03 193 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 SPATA12Q7Z6I5 190 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 APRG1Q8IVJ8 170 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 ATOH7Q8N100 152 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 TCAPO15273 167 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 NPYP01303 97 aa15.17■□□□□ 0.02
SSH3-202ENST00000308298 SYNJ2BPP57105 145 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 WFDC3Q8IUB2 231 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 TEX29Q8N6K0 151 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 IGHV4-4A0A075B6R2 117 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 CACNG7P62955 275 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 MAP1LC3CQ9BXW4 147 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 MS4A6AQ9H2W1 248 aa15.16■□□□□ 0.02
SSH3-202ENST00000308298 H3BVH4 76 aa15.15■□□□□ 0.02
SSH3-202ENST00000308298 HOXD3P31249 432 aaPredicted RBP15.15■□□□□ 0.02
SSH3-202ENST00000308298 LAMTOR2Q9Y2Q5 125 aa15.15■□□□□ 0.02
SSH3-202ENST00000308298 C20orf202A1L168 122 aa15.14■□□□□ 0.01
SSH3-202ENST00000308298 TCF21O43680 179 aa15.14■□□□□ 0.01
SSH3-202ENST00000308298 RNASE4P34096 147 aaKnown RBP15.14■□□□□ 0.01
SSH3-202ENST00000308298 SPANXN1Q5VSR9 72 aa15.14■□□□□ 0.01
SSH3-202ENST00000308298 SMIM15Q7Z3B0 74 aa15.14■□□□□ 0.01
SSH3-202ENST00000308298 KLHDC1Q8N7A1 406 aa15.14■□□□□ 0.01
SSH3-202ENST00000308298 TIMM8BQ9Y5J9 83 aaPredicted RBP15.14■□□□□ 0.01
SSH3-202ENST00000308298 ITPR3Q14573 2671 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 TRAV9-2A0A087WT02 112 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 PET117Q6UWS5 81 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 TMEM86BQ8N661 226 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 MAP1LC3AQ9H492 121 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 UQCR10Q9UDW1 63 aa15.13■□□□□ 0.01
SSH3-202ENST00000308298 A0A096LNJ9 63 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 EVI2AP22794 236 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 TFPI2P48307 235 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 NBPF19A0A087WUL8 3843 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 OR4C46A6NHA9 309 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 MAJINQ3KP22 176 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 ANXA2RQ3ZCQ2 193 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 ZNF747Q9BV97 191 aa15.12■□□□□ 0.01
SSH3-202ENST00000308298 ZNF688P0C7X2 276 aa15.11■□□□□ 0.01
SSH3-202ENST00000308298 FOSL1P15407 271 aa15.11■□□□□ 0.01
SSH3-202ENST00000308298 ASIPP42127 132 aa15.11■□□□□ 0.01
SSH3-202ENST00000308298 KIR3DS1Q14943 382 aa15.11■□□□□ 0.01
SSH3-202ENST00000308298 KLLNB2CW77 178 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 K7EQG2 157 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 GAS8-AS1O95177 125 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 TNFRSF6BO95407 300 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 IGLC3P0DOY3 106 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 SNRPD3P62318 126 aaKnown RBP15.1■□□□□ 0.01
SSH3-202ENST00000308298 MED14OSP0DP75 135 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 S100A4P26447 101 aaKnown RBP15.1■□□□□ 0.01
SSH3-202ENST00000308298 PSMG4Q5JS54 123 aa15.1■□□□□ 0.01
SSH3-202ENST00000308298 ZNF469Q96JG9 3925 aaPredicted RBP15.09■□□□□ 0.01
SSH3-202ENST00000308298 HBDP02042 147 aa15.08■□□□□ 0
SSH3-202ENST00000308298 C18orf65Q6ZTR6 163 aa15.08■□□□□ 0
SSH3-202ENST00000308298 LINC01546A6NGU7 62 aa15.07■□□□□ 0
SSH3-202ENST00000308298 H0Y8G0 127 aa15.07■□□□□ 0
SSH3-202ENST00000308298 IGLL1P15814 213 aa15.07■□□□□ 0
SSH3-202ENST00000308298 GATA1P15976 413 aaPredicted RBP15.07■□□□□ 0
SSH3-202ENST00000308298 DEFB136Q30KP8 78 aa15.07■□□□□ 0
SSH3-202ENST00000308298 LINC01545Q5VT33 79 aa15.07■□□□□ 0
SSH3-202ENST00000308298 ODF3Q96PU9 254 aa15.07■□□□□ 0
SSH3-202ENST00000308298 NXT2Q9NPJ8 142 aaKnown RBP15.07■□□□□ 0
SSH3-202ENST00000308298 A0A0J9YX75 114 aa15.07■□□□□ 0
SSH3-202ENST00000308298 SLURP1P55000 103 aa15.07■□□□□ 0
SSH3-202ENST00000308298 SCRT2Q9NQ03 307 aa15.07■□□□□ 0
SSH3-202ENST00000308298 OR2K2Q8NGT1 345 aa15.06■□□□□ 0
SSH3-202ENST00000308298 C4orf3Q8WVX3 66 aa15.06■□□□□ 0
SSH3-202ENST00000308298 PHLDA3Q9Y5J5 127 aa15.06■□□□□ 0
SSH3-202ENST00000308298 DNAJC9-AS1A6NH13 148 aa15.05■□□□□ 0
SSH3-202ENST00000308298 LINC01619G3V211 115 aa15.05■□□□□ 0
SSH3-202ENST00000308298 M0R381 172 aa15.05■□□□□ 0
SSH3-202ENST00000308298 GNRH2O43555 120 aa15.05■□□□□ 0
SSH3-202ENST00000308298 LEPP41159 167 aa15.05■□□□□ 0
SSH3-202ENST00000308298 TCTEX1D4Q5JR98 221 aa15.05■□□□□ 0
SSH3-202ENST00000308298 HNRNPA3P51991 378 aaKnown RBP15.05■□□□□ -0
SSH3-202ENST00000308298 FXYD7P58549 80 aa15.05■□□□□ -0
SSH3-202ENST00000308298 ZNF124Q15973 351 aa15.05■□□□□ -0
SSH3-202ENST00000308298 ADAMTSL5Q6ZMM2 481 aa15.05■□□□□ -0
SSH3-202ENST00000308298 MCRIP2Q9BUT9 160 aaKnown RBP15.05■□□□□ -0
SSH3-202ENST00000308298 RNASE3P12724 160 aaKnown RBP15.04■□□□□ -0
SSH3-202ENST00000308298 COL5A1-AS1Q5SY13 56 aa15.04■□□□□ -0
SSH3-202ENST00000308298 Q6ZN92 141 aa15.04■□□□□ -0
SSH3-202ENST00000308298 Q6ZSV7 163 aa15.04■□□□□ -0
SSH3-202ENST00000308298 NRACQ8N912 160 aa15.04■□□□□ -0
SSH3-202ENST00000308298 MRAP2Q96G30 205 aa15.04■□□□□ -0
SSH3-202ENST00000308298 TLN2Q9Y4G6 2542 aa15.04■□□□□ -0
SSH3-202ENST00000308298 TRAV26-2A0A0B4J265 109 aa15.04■□□□□ -0
SSH3-202ENST00000308298 FAM159AQ6UWV7 190 aa15.04■□□□□ -0
SSH3-202ENST00000308298 WFDC12Q8WWY7 111 aa15.04■□□□□ -0
SSH3-202ENST00000308298 C7orf71A4D174 169 aa15.03■□□□□ -0
SSH3-202ENST00000308298 KHDC1LQ5JSQ8 128 aa15.03■□□□□ -0
SSH3-202ENST00000308298 Q8N8P6 123 aa15.03■□□□□ -0
SSH3-202ENST00000308298 OR11H1Q8NG94 326 aa15.03■□□□□ -0
SSH3-202ENST00000308298 DPF1Q92782 380 aa15.03■□□□□ -0
SSH3-202ENST00000308298 ST20Q9HBF5 79 aa15.03■□□□□ -0
SSH3-202ENST00000308298 FLNAP21333 2647 aaKnown RBP15.03■□□□□ -0
SSH3-202ENST00000308298 PDZD2O15018 2839 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms