RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
TRIM56-201ENST00000306085 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
TRIM56-201ENST00000306085 FOXF2Q12947 444 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 C3orf22Q8N5N4 141 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 BDP1A6H8Y1 2624 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 IGLV10-54A0A075B6I4 117 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 E9PQ18 207 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 LINC00205P59089 165 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 CYTL1Q9NRR1 136 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 UBE2E1P51965 193 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 CD177Q8N6Q3 437 aa10.76□□□□□ -0.69
TRIM56-201ENST00000306085 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 C15orf62A8K5M9 175 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 NOP10Q9NPE3 64 aaKnown RBP10.75□□□□□ -0.69
TRIM56-201ENST00000306085 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 CFC1P0CG37 223 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 IGLV3-21P80748 117 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-201ENST00000306085 RUSC1-AS1Q66K80 236 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 KLF2Q9Y5W3 355 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-201ENST00000306085 Q71RC1 249 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-201ENST00000306085 DKK2Q9UBU2 259 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 TEX36Q5VZQ5 186 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 LGALS9CQ6DKI2 356 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 IGKV1-16P04430 117 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 ATG2AQ2TAZ0 1938 aa10.75□□□□□ -0.69
TRIM56-201ENST00000306085 PAQR4Q8N4S7 273 aaPredicted RBP10.75□□□□□ -0.69
TRIM56-201ENST00000306085 CFPP27918 469 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 TMEM61Q8N0U2 210 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 LYPD6Q86Y78 171 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 IGLV2-23P01705 113 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 PRR15LQ9BU68 103 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 OPRPNQ99935 248 aaPredicted RBP10.74□□□□□ -0.69
TRIM56-201ENST00000306085 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 NCR3O14931 201 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 FAM110AQ9BQ89 295 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 NDUFS7O75251 213 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 RNF5Q99942 180 aa10.74□□□□□ -0.69
TRIM56-201ENST00000306085 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
TRIM56-201ENST00000306085 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 MLANAQ16655 118 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 LTBP4Q8N2S1 1624 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 LY6HO94772 140 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 ZNF106Q9H2Y7 1883 aaKnown RBP10.73□□□□□ -0.69
TRIM56-201ENST00000306085 GLI3P10071 1580 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 IGKV1-27A0A075B6S5 117 aa10.73□□□□□ -0.69
TRIM56-201ENST00000306085 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 LYPD3O95274 346 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
TRIM56-201ENST00000306085 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 CFHR1Q03591 330 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 A0A0G2JMZ2 1700 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 LRRC37AA6NMS7 1700 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
TRIM56-201ENST00000306085 TRAV26-1A0A087WT03 109 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 IGHV4-59P01825 116 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 MRPS18CQ9Y3D5 142 aaKnown RBP10.71□□□□□ -0.69
TRIM56-201ENST00000306085 MGAMO43451 1857 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 E9PLN8 166 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 WDR86Q86TI4 376 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
TRIM56-201ENST00000306085 USP17L23D6RBM5 183 aa10.71□□□□□ -0.69
TRIM56-201ENST00000306085 ADAMTS9Q9P2N4 1935 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 K7EMI3 77 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 LYL1P12980 280 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 NOTCH2Q04721 2471 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 SND1-IT1Q9HBX3 110 aa10.71□□□□□ -0.7
TRIM56-201ENST00000306085 C5orf24Q7Z6I8 188 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 IGKV1-12A0A0C4DH73 117 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 IGKV1D-12P01611 117 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 LTAP01374 205 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 DAND5Q8N907 189 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 LINC01620Q4KN68 170 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 GAFA1Q96PS6 74 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 H3BQ85 93 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 SIVA1O15304 175 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
TRIM56-201ENST00000306085 PCP2Q8IVA1 136 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 NDUFB8O95169 186 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 NLRC5Q86WI3 1866 aa10.7□□□□□ -0.7
TRIM56-201ENST00000306085 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 GFI1Q99684 422 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 RHOHQ15669 191 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 Q6ZVH6 145 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 HERV-K104P63124 156 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms