RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 LINC00477Q96M19 166 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 HSBP1O75506 76 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
USP47-201ENST00000305481 KIR3DS1Q14943 382 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 TWIST1Q15672 202 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 HIST2H2BDQ6DRA6 164 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 OR8A1Q8NGG7 326 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 BORCS7Q96B45 105 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 U3KQK5 164 aa4.93□□□□□ -1.62
USP47-201ENST00000305481 FASNP49327 2511 aaKnown RBP4.92□□□□□ -1.62
USP47-201ENST00000305481 C3orf79P0CE67 100 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 KRTDAPP60985 99 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 DEFB136Q30KP8 78 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 ADAMTSL5Q6ZMM2 481 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 KLHDC1Q8N7A1 406 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 OR10J6PQ8NGY7 276 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 ESM1Q9NQ30 184 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 LENEPQ9Y5L5 61 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 HECTD1Q9ULT8 2610 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 LGALS9O00182 355 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 LINC00614P0C842 121 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 EBLN2Q6P2I7 272 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 WFDC3Q8IUB2 231 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 TMEM86BQ8N661 226 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 MS4A6AQ9H2W1 248 aa4.92□□□□□ -1.62
USP47-201ENST00000305481 IGHV1-24A0A0C4DH33 117 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 DNAJC9-AS1A6NH13 148 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 D6R8Y8 96 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 M0R2Z0 102 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 PTTG1IPP53801 180 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 MRPL51Q4U2R6 128 aaKnown RBP4.91□□□□□ -1.62
USP47-201ENST00000305481 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 CHCHD1Q96BP2 118 aaKnown RBP4.91□□□□□ -1.62
USP47-201ENST00000305481 RNF185Q96GF1 192 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 FOXC2Q99958 501 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 C2orf70A6NJV1 201 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 GAS8-AS1O95177 125 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 CSN3P07498 182 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 Q6ZSV7 163 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 APRG1Q8IVJ8 170 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 OR10AG1Q8NH19 301 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 TFPI2P48307 235 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 SLURP1P55000 103 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 LINC00173Q6ZV60 143 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 SPATA12Q7Z6I5 190 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 TMEM191AQ9H0A3 160 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 MTORP42345 2549 aa4.91□□□□□ -1.62
USP47-201ENST00000305481 TSTD3H0UI37 97 aa4.9□□□□□ -1.62
USP47-201ENST00000305481 SMKR1H3BMG3 65 aa4.9□□□□□ -1.62
USP47-201ENST00000305481 LBHQ53QV2 105 aaPredicted RBP4.9□□□□□ -1.62
USP47-201ENST00000305481 DUX3Q96PT4 197 aa4.9□□□□□ -1.62
USP47-201ENST00000305481 CD5LO43866 347 aa4.9□□□□□ -1.62
USP47-201ENST00000305481 RNASE4P34096 147 aaKnown RBP4.9□□□□□ -1.62
USP47-201ENST00000305481 PRELID3AQ96N28 172 aa4.9□□□□□ -1.62
USP47-201ENST00000305481 KIR2DL5BA0A0G2JN68 375 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 KIR2DL5BA0A0G2JPC4 375 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 K7EQG2 157 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 SPRY2O43597 315 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 SNAI2O43623 268 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 ZNF688P0C7X2 276 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 IFI27P40305 119 aaPredicted RBP4.9□□□□□ -1.63
USP47-201ENST00000305481 ID1P41134 155 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 KIR2DL5AQ8N109 375 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 ORMDL3Q8N138 153 aa4.9□□□□□ -1.63
USP47-201ENST00000305481 TRBV7-9A0A0J9YWB2 115 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 KLLNB2CW77 178 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 NCR2O95944 276 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 NPYP01303 97 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 OR5AL1P0C617 328 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 EVI2AP22794 236 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 PSMG4Q5JS54 123 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 YAE1D1Q9NRH1 226 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 SIGLEC8Q9NYZ4 499 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 SORL1Q92673 2214 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 IGHV4-4A0A075B6R2 117 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 TRAV21A0A0B4J279 112 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 H3BVH4 76 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 ANXA2RQ3ZCQ2 193 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 TEX29Q8N6K0 151 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 OR11H1Q8NG94 326 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 C4orf3Q8WVX3 66 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 OTOGQ6ZRI0 2925 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 A0A096LNJ9 63 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 CKS2P33552 79 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 GAGE1Q13065 139 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 SAMD13Q5VXD3 122 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
USP47-201ENST00000305481 SETD2Q9BYW2 2564 aaPredicted RBP4.88□□□□□ -1.63
USP47-201ENST00000305481 LINC01619G3V211 115 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 GNRH2O43555 120 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 GATA1P15976 413 aaPredicted RBP4.88□□□□□ -1.63
USP47-201ENST00000305481 PRSS3P2Q8NHM4 247 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 AP5S1Q9NUS5 200 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
USP47-201ENST00000305481 A0A0J9YX75 114 aa4.88□□□□□ -1.63
USP47-201ENST00000305481 CRXO43186 299 aaPredicted RBP4.88□□□□□ -1.63
USP47-201ENST00000305481 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms