RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 AGPAT4-IT1Q9H0P7 198 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 GNRH2O43555 120 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 KLF5Q13887 457 aaPredicted RBP10.96□□□□□ -0.66
PRKCB-201ENST00000303531 GRNP28799 593 aaKnown RBP10.96□□□□□ -0.66
PRKCB-201ENST00000303531 TAL2Q16559 108 aa10.96□□□□□ -0.66
PRKCB-201ENST00000303531 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.66
PRKCB-201ENST00000303531 ELANEP08246 267 aa10.96□□□□□ -0.66
PRKCB-201ENST00000303531 MRPL53Q96EL3 112 aaKnown RBP10.96□□□□□ -0.66
PRKCB-201ENST00000303531 ZNF747Q9BV97 191 aa10.96□□□□□ -0.66
PRKCB-201ENST00000303531 ATP6V0BQ99437 205 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 PIP4P1Q86T03 277 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 LHBP01229 141 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
PRKCB-201ENST00000303531 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 H3BMG7 143 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 H3BUA1 57 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 DENND4CQ5VZ89 1909 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 KRTAP27-1Q3LI81 207 aa10.95□□□□□ -0.66
PRKCB-201ENST00000303531 HERVK_113P63121 156 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 SIVA1O15304 175 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 MED13Q9UHV7 2174 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 A0A096LPF7 62 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 WT1P19544 449 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-201ENST00000303531 PRSS33Q8NF86 280 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 RNF138Q8WVD3 245 aa10.94□□□□□ -0.66
PRKCB-201ENST00000303531 RBAKDNA6NC62 111 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 C9orf153Q5TBE3 101 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 SPRY2O43597 315 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 APOC4P55056 127 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
PRKCB-201ENST00000303531 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 GATA1P15976 413 aaPredicted RBP10.92□□□□□ -0.66
PRKCB-201ENST00000303531 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 RITA1Q96K30 269 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 DEFB112Q30KQ8 113 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 C12orf74Q32Q52 190 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 IGF2BP2-AS1Q96M15 143 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 GP9P14770 177 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 NUP210Q8TEM1 1887 aaPredicted RBP10.92□□□□□ -0.66
PRKCB-201ENST00000303531 CLPSL2Q6UWE3 100 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 SLX1AQ9BQ83 275 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
PRKCB-201ENST00000303531 Q71RC1 249 aaPredicted RBP10.91□□□□□ -0.66
PRKCB-201ENST00000303531 HOXD3P31249 432 aaPredicted RBP10.91□□□□□ -0.66
PRKCB-201ENST00000303531 Q6ZSR3 168 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 TNCP24821 2201 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 I3L2K1 104 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 TRAV13-2A0A0B4J235 113 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 ANGP03950 147 aaKnown RBP10.91□□□□□ -0.66
PRKCB-201ENST00000303531 CENPVL3A0A0U1RRI6 287 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 CRLF1O75462 422 aa10.91□□□□□ -0.66
PRKCB-201ENST00000303531 UTF1Q5T230 341 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 LYPD6Q86Y78 171 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 UBL5Q9BZL1 73 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 TMEM126AQ9H061 195 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
PRKCB-201ENST00000303531 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 K7EIM0 57 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 RHOHQ15669 191 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.9□□□□□ -0.66
PRKCB-201ENST00000303531 IGKV2-29A2NJV5 120 aaPredicted RBP10.9□□□□□ -0.66
PRKCB-201ENST00000303531 U3KQE9 123 aa10.9□□□□□ -0.66
PRKCB-201ENST00000303531 NCKAP5O14513 1909 aa10.9□□□□□ -0.67
PRKCB-201ENST00000303531 IGHV7-81A0A0B4J1V7 117 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 HAMPP81172 84 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 NPBQ8NG41 125 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 PTPRQQ9UMZ3 2332 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 PATE2Q6UY27 113 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 IGFL2Q6UWQ7 119 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 K7EMI3 77 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 Q6ZVH6 145 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
PRKCB-201ENST00000303531 DKK4Q9UBT3 224 aa10.89□□□□□ -0.67
PRKCB-201ENST00000303531 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
PRKCB-201ENST00000303531 NUPR1O60356 82 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 IGKV1-17P01599 117 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
PRKCB-201ENST00000303531 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 GAGE12HA6NDE8 117 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
PRKCB-201ENST00000303531 RPL39LQ96EH5 51 aaKnown RBP10.88□□□□□ -0.67
PRKCB-201ENST00000303531 IGLV11-55A0A075B6I3 123 aa10.87□□□□□ -0.67
PRKCB-201ENST00000303531 WNK1Q9H4A3 2382 aa10.87□□□□□ -0.67
PRKCB-201ENST00000303531 CCL25O15444 150 aa10.87□□□□□ -0.67
PRKCB-201ENST00000303531 NBL1P41271 181 aa10.87□□□□□ -0.67
PRKCB-201ENST00000303531 XCL1P47992 114 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms