RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ETDCA0A1B0GVM5 59 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 DKK2Q9UBU2 259 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 C2orf70A6NJV1 201 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 P0DMU3 169 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 FAM231AP0DMU4 169 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 FAM231CP0DMU5 169 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 HSD52Q0P140 79 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 KIR3DS1Q14943 382 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 TP53TG3Q9ULZ0 132 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 PRSS46E5RG02 174 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 ADAMTS9Q9P2N4 1935 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 K7ERJ3 54 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 RHODO00212 210 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 C4orf48Q5BLP8 95 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 C18orf65Q6ZTR6 163 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 FAM231DQ6ZW35 169 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 NDUFA12Q9UI09 145 aa6.06□□□□□ -1.44
SCN9A-201ENST00000303354 PHF3Q92576 2039 aaKnown RBP6.06□□□□□ -1.44
SCN9A-201ENST00000303354 PLXND1Q9Y4D7 1925 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 PI4KAP42356 2102 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 FOXI1Q12951 378 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 MSRB1Q9NZV6 116 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 C9JQL5 133 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 UNQ9165/PRO28630Q6UXU0 137 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 FXYD5Q96DB9 178 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 K7EQD1 137 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 POLEQ07864 2286 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 E7EUB6 86 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 FAM104BQ5XKR9 115 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 SRSF8Q9BRL6 282 aaKnown RBP6.05□□□□□ -1.44
SCN9A-201ENST00000303354 PCP4P48539 62 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 MRPL23Q16540 153 aaKnown RBP6.05□□□□□ -1.44
SCN9A-201ENST00000303354 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 VSIG2Q96IQ7 327 aa6.05□□□□□ -1.44
SCN9A-201ENST00000303354 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
SCN9A-201ENST00000303354 LINC01549A6NIU2 74 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 MAJINQ3KP22 176 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 Q8N8P6 123 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 C16orf74Q96GX8 76 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 Q9H8V8 135 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
SCN9A-201ENST00000303354 FGF6P10767 208 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 C22orf34Q6ZV56 151 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 TRAV26-1A0A087WT03 109 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 HIST3H2BBQ8N257 126 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 TMEM141Q96I45 108 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 CITED1Q99966 193 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 MSMPQ1L6U9 139 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 Q8N1Y9 231 aa6.04□□□□□ -1.44
SCN9A-201ENST00000303354 FANCMQ8IYD8 2048 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 GTSF1LQ9H1H1 148 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 DNAJC30Q96LL9 226 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 SOCS3O14543 225 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 Q8NFD4 153 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 PTPRDP23468 1912 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 PRM2P04554 102 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 IGLC7A0M8Q6 106 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 CACNA1EQ15878 2313 aa6.03□□□□□ -1.44
SCN9A-201ENST00000303354 RPL39P62891 51 aaKnown RBP6.02□□□□□ -1.44
SCN9A-201ENST00000303354 OXLD1Q5BKU9 147 aa6.02□□□□□ -1.44
SCN9A-201ENST00000303354 IGFL2Q6UWQ7 119 aa6.02□□□□□ -1.44
SCN9A-201ENST00000303354 COL6A6A6NMZ7 2263 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 IGHG4P01861 327 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 IGKV1-17P01599 117 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 PDE6HQ13956 83 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 LINC00311Q8N616 119 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 HELZP42694 1942 aaKnown RBP6.02□□□□□ -1.45
SCN9A-201ENST00000303354 UTF1Q5T230 341 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 C4orf3Q8WVX3 66 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 IGF1P05019 195 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 SPATA25Q9BR10 227 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 MDFICQ9P1T7 246 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 UBE2CO00762 179 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 OR11H6Q8NGC7 330 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 OPRPNQ99935 248 aaPredicted RBP6.02□□□□□ -1.45
SCN9A-201ENST00000303354 TP53BP1Q12888 1972 aaPredicted RBP6.02□□□□□ -1.45
SCN9A-201ENST00000303354 COX7A2LO14548 114 aa6.02□□□□□ -1.45
SCN9A-201ENST00000303354 K7EN84 100 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 ESPL1Q14674 2120 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 TRACP01848 142 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 RP1L1Q8IWN7 2480 aaPredicted RBP6.01□□□□□ -1.45
SCN9A-201ENST00000303354 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 COLCA2A8K830 154 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 MYCNOSP40205 109 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PYGO2Q9BRQ0 406 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 RETNQ9HD89 108 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 ZNF492Q9P255 531 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 DOCK9Q9BZ29 2069 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 ADCYAP1P18509 176 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 TMEM61Q8N0U2 210 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 DIDO1Q9BTC0 2240 aaKnown RBP6.01□□□□□ -1.45
SCN9A-201ENST00000303354 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PLA2G2AP14555 144 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 HERVK_113P63121 156 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PRR20EP86478 221 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms