RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 CYTL1Q9NRR1 136 aa11.32□□□□□ -0.6
RECQL4-201ENST00000301323 ICOSQ9Y6W8 199 aa11.32□□□□□ -0.6
RECQL4-201ENST00000301323 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 PAX4O43316 350 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 SFTA3P0C7M3 94 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
RECQL4-201ENST00000301323 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
RECQL4-201ENST00000301323 IQCF2Q8IXL9 164 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 ZNF479Q96JC4 524 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
RECQL4-201ENST00000301323 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 K7EQM0 130 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 TAAR5O14804 337 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 GNRH2O43555 120 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
RECQL4-201ENST00000301323 TNP2Q05952 138 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 SLAQ13239 276 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 TTC32Q5I0X7 151 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 C11orf21Q9P2W6 132 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 RYR1P21817 5038 aa11.3□□□□□ -0.6
RECQL4-201ENST00000301323 M0R2P5 195 aa11.29□□□□□ -0.6
RECQL4-201ENST00000301323 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
RECQL4-201ENST00000301323 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
RECQL4-201ENST00000301323 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
RECQL4-201ENST00000301323 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
RECQL4-201ENST00000301323 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
RECQL4-201ENST00000301323 GCGP01275 180 aa11.28□□□□□ -0.6
RECQL4-201ENST00000301323 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
RECQL4-201ENST00000301323 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
RECQL4-201ENST00000301323 ZNF345Q14585 488 aa11.28□□□□□ -0.6
RECQL4-201ENST00000301323 PRNTQ86SH4 94 aa11.28□□□□□ -0.6
RECQL4-201ENST00000301323 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 UBE2G2P60604 165 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 KCNRGQ8N5I3 272 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 LINC00479Q96M42 142 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 HSPG2P98160 4391 aa11.27□□□□□ -0.61
RECQL4-201ENST00000301323 FAM74A7A6NL05 159 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 K7EQD1 137 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 PEX7O00628 323 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
RECQL4-201ENST00000301323 SMUG1Q53HV7 270 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 Q86TA4 180 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 OR11H4Q8NGC9 324 aa11.26□□□□□ -0.61
RECQL4-201ENST00000301323 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 NXPH4O95158 308 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 SAPCD1Q5SSQ6 148 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 OR4C5Q8NGB2 326 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 ARL2-SNX15V9GYD0 113 aa11.25□□□□□ -0.61
RECQL4-201ENST00000301323 HMSDA8MTL9 139 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 IFNA7P01567 189 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 FHITP49789 147 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 NEGR1Q7Z3B1 354 aa11.24□□□□□ -0.61
RECQL4-201ENST00000301323 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
RECQL4-201ENST00000301323 SIVA1O15304 175 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 ORM1P02763 201 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 GYPEP15421 78 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 GATA1P15976 413 aaPredicted RBP11.23□□□□□ -0.61
RECQL4-201ENST00000301323 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
RECQL4-201ENST00000301323 SRIP30626 198 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 PPT1P50897 306 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
RECQL4-201ENST00000301323 APOBP04114 4563 aaKnown RBP11.23□□□□□ -0.61
RECQL4-201ENST00000301323 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
RECQL4-201ENST00000301323 C9JCJ5 164 aa11.22□□□□□ -0.61
RECQL4-201ENST00000301323 BCL2L11O43521 198 aa11.22□□□□□ -0.61
RECQL4-201ENST00000301323 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
RECQL4-201ENST00000301323 LINC00315P59091 139 aa11.22□□□□□ -0.61
RECQL4-201ENST00000301323 ZNF876PQ49A33 203 aa11.22□□□□□ -0.61
RECQL4-201ENST00000301323 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
RECQL4-201ENST00000301323 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
RECQL4-201ENST00000301323 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
RECQL4-201ENST00000301323 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
RECQL4-201ENST00000301323 CFAP126Q5VTH2 177 aa11.21□□□□□ -0.61
RECQL4-201ENST00000301323 PTH2Q96A98 100 aa11.21□□□□□ -0.61
RECQL4-201ENST00000301323 A0A0D9SG52 128 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 RS1O15537 224 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
RECQL4-201ENST00000301323 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 WFDC10BQ8IUB3 73 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 TCEAL7Q9BRU2 100 aa11.2□□□□□ -0.62
RECQL4-201ENST00000301323 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
RECQL4-201ENST00000301323 STOML3Q8TAV4 291 aa11.19□□□□□ -0.62
RECQL4-201ENST00000301323 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
RECQL4-201ENST00000301323 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms