RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OR11H6Q8NGC7 330 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 Q9H8V8 135 aa10.66□□□□□ -0.7
CHRFAM7A-201ENST00000299847 PCP2Q8IVA1 136 aa10.65□□□□□ -0.7
CHRFAM7A-201ENST00000299847 PPDPFLQ8WWR9 84 aa10.65□□□□□ -0.7
CHRFAM7A-201ENST00000299847 ZMAT4Q9H898 229 aa10.65□□□□□ -0.7
CHRFAM7A-201ENST00000299847 IGHV2-5P01817 119 aa10.65□□□□□ -0.7
CHRFAM7A-201ENST00000299847 K7EP13 123 aa10.65□□□□□ -0.7
CHRFAM7A-201ENST00000299847 F8VRH5 84 aa10.65□□□□□ -0.71
CHRFAM7A-201ENST00000299847 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IGFL3Q6UXB1 125 aa10.65□□□□□ -0.71
CHRFAM7A-201ENST00000299847 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DEFB4AO15263 64 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IFITM1P13164 125 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 SPTA1P02549 2419 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 LINC00311Q8N616 119 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 AGPAT4-IT1Q9H0P7 198 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TSC2P49815 1807 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DOCK8Q8NF50 2099 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 CRYBA4P53673 196 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DOCK7Q96N67 2140 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 MGAMO43451 1857 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IGHV4-30-2A0A087WSY4 118 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 CLPSL1A2RUU4 121 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IGLC7A0M8Q6 106 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 CFPP27918 469 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DAND5Q8N907 189 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 NTN5Q8WTR8 489 aaPredicted RBP10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 J3QLI3 93 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
CHRFAM7A-201ENST00000299847 F8W1H4 67 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DEFB1P60022 68 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 CCL25O15444 150 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 BUB3O43684 328 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IGHV2-70P01814 119 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 IGHV4-61A0A0C4DH41 118 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 NCR3O14931 201 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TRACP01848 142 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 BLCAPP62952 87 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 LINC00173Q6ZV60 143 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 FGF23Q9GZV9 251 aaPredicted RBP10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 RHOHQ15669 191 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PLA2G2CQ5R387 149 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 C11orf53Q8IXP5 236 aa10.62□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TRAV4A0A0B4J268 109 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 GYPEP15421 78 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PLXNA4Q9HCM2 1894 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 CITED1Q99966 193 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 RMI2Q96E14 147 aa10.61□□□□□ -0.71
CHRFAM7A-201ENST00000299847 DOCK10Q96BY6 2186 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 ETV2O00321 342 aaPredicted RBP10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 BAALC-AS2P0C853 105 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 NBL1P41271 181 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 UTF1Q5T230 341 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 NPBQ8NG41 125 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 RLFQ13129 1914 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 COL6A6A6NMZ7 2263 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 TIMM17AQ99595 171 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 ELANEP08246 267 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PRR20EP86478 221 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PRR20CP86479 221 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PRR20DP86480 221 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PRR20BP86481 221 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PRR20AP86496 221 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
CHRFAM7A-201ENST00000299847 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 AJUBAQ96IF1 538 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PYGO2Q9BRQ0 406 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 PLXNA2O75051 1894 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
CHRFAM7A-201ENST00000299847 C10orf91Q5T1B1 145 aa10.58□□□□□ -0.72
CHRFAM7A-201ENST00000299847 CENPVL3A0A0U1RRI6 287 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 PROP1O75360 226 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 HEATR5AQ86XA9 2040 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 A0A087WW49 117 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 GP9P14770 177 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 DIDO1Q9BTC0 2240 aaKnown RBP10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 K7EQD1 137 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 NLRC5Q86WI3 1866 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 CADP27708 2225 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 F8W735 103 aaPredicted RBP10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 NUPR1O60356 82 aa10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 RPL39P62891 51 aaKnown RBP10.57□□□□□ -0.72
CHRFAM7A-201ENST00000299847 IGHV7-81A0A0B4J1V7 117 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ZNF747Q9BV97 191 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 NCOR1P1Q9H4R4 102 aa10.56□□□□□ -0.72
CHRFAM7A-201ENST00000299847 ORMDL1Q9P0S3 153 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms