RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MLST8Q9BVC4 326 aa7.84□□□□□ -1.16
FOXN4-201ENST00000299162 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.16
FOXN4-201ENST00000299162 ORM1P02763 201 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 SRD5A1P18405 259 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 SPAG8Q99932 426 aaPredicted RBP7.83□□□□□ -1.16
FOXN4-201ENST00000299162 YAE1D1Q9NRH1 226 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 D6R8Y8 96 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 H3BUX3 64 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 SPRY2O43597 315 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 SCGB2A1O75556 95 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 WFDC2Q14508 124 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 Q6ZS46 218 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 MINOS1-NBL1R4GNA1 71 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 FBN2P35556 2912 aa7.83□□□□□ -1.16
FOXN4-201ENST00000299162 A0A1W2PPM0 123 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 TMEM213A2RRL7 107 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 BLCAPP62952 87 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 TTC9CQ8N5M4 171 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 ZNF747Q9BV97 191 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 KLF12Q9Y4X4 402 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 H3BMG7 143 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 TGFAP01135 160 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 TRBV12-3P01733 135 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 TRGV3P03979 118 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 CRIP1P50238 77 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 AMN1Q8IY45 258 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 WIPF2Q8TF74 440 aaPredicted RBP7.82□□□□□ -1.16
FOXN4-201ENST00000299162 NDFIP1Q9BT67 221 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 PRRC2AP48634 2157 aaKnown RBP7.82□□□□□ -1.16
FOXN4-201ENST00000299162 A0A1B0GUT8 65 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 SMIM13P0DJ93 91 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 FXYD2P54710 66 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 DUX5Q96PT3 197 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 PIMREGQ9BSJ6 248 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 MS4A6AQ9H2W1 248 aa7.82□□□□□ -1.16
FOXN4-201ENST00000299162 M0QXV9 152 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 RPL7P18124 248 aaKnown RBP7.81□□□□□ -1.16
FOXN4-201ENST00000299162 EVI2AP22794 236 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 WI2-2373I1.2A0A1W2PRP0 233 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 H3BRM9 83 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 MT-ATP8P03928 68 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 Q6ZQT7 251 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 GTSCR1Q86UQ5 136 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 Q8N6K4 173 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
FOXN4-201ENST00000299162 SPANXB1Q9NS25 103 aaPredicted RBP7.81□□□□□ -1.16
FOXN4-201ENST00000299162 TMEM189A5PLL7 270 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 RASL11AQ6T310 242 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 ZNF418Q8TF45 676 aaPredicted RBP7.8□□□□□ -1.16
FOXN4-201ENST00000299162 GLMPQ8WWB7 406 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 KLK15Q9H2R5 256 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 SMAD5-AS1Q9Y6J3 95 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 SMAD7O15105 426 aaKnown RBP7.8□□□□□ -1.16
FOXN4-201ENST00000299162 GAGE5Q13069 117 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 GAGE6Q13070 117 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 TWIST1Q15672 202 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 LYZL1Q6UWQ5 148 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 ATP5L2Q7Z4Y8 100 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 NF1P21359 2839 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 SH2D1AO60880 128 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
FOXN4-201ENST00000299162 DPF1Q92782 380 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 PRELID3AQ96N28 172 aa7.8□□□□□ -1.16
FOXN4-201ENST00000299162 CRXO43186 299 aaPredicted RBP7.79□□□□□ -1.16
FOXN4-201ENST00000299162 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 CKS2P33552 79 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 TRAV41A0A0B4J266 112 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 AVPP01185 164 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 OR5A1Q8NGJ0 315 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 PRSS22Q9GZN4 317 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 TMEM160Q9NX00 188 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 MSRB1Q9NZV6 116 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 IGHV1-69DA0A0B4J2H0 117 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 RIGQ13278 110 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
FOXN4-201ENST00000299162 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
FOXN4-201ENST00000299162 IL17RELQ6ZVW7 336 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 C5orf56Q8N8D9 126 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 ZNF502Q8TBZ5 544 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 C1QTNF4Q9BXJ3 329 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 SIGLEC8Q9NYZ4 499 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 A4D1N5 150 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms