RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 C9orf139Q6ZV77 190 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 SIVA1O15304 175 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 IGKCP01834 107 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 EDN2P20800 178 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
BCCIP-202ENST00000299130 H3BRM9 83 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 H3BUT2 72 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 H3BUX3 64 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 M0R381 172 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 LAGE3Q14657 143 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 OR4X2Q8NGF9 303 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 MEGF9Q9H1U4 602 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 PRORYQ9H606 182 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
BCCIP-202ENST00000299130 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
BCCIP-202ENST00000299130 NDUFA4O00483 81 aa10.31□□□□□ -0.76
BCCIP-202ENST00000299130 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
BCCIP-202ENST00000299130 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
BCCIP-202ENST00000299130 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
BCCIP-202ENST00000299130 A6NDN8 102 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 SRD5A1P18405 259 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 CLEC2AQ6UVW9 174 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 GNRH2O43555 120 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 CIDEAO60543 219 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 DPM2O94777 84 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 PF4V1P10720 104 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
BCCIP-202ENST00000299130 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
BCCIP-202ENST00000299130 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 ATP6V0BQ99437 205 aa10.3□□□□□ -0.76
BCCIP-202ENST00000299130 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 A6NDX4 124 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 ATP5LO75964 103 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 IGHG2P01859 326 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 C14orf178Q8N769 122 aaPredicted RBP10.29□□□□□ -0.76
BCCIP-202ENST00000299130 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 RASL10AQ92737 203 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 LENEPQ9Y5L5 61 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 SPTAN1Q13813 2472 aaKnown RBP10.29□□□□□ -0.76
BCCIP-202ENST00000299130 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 GAGE10A6NGK3 116 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 K7EMI3 77 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 CDKN1BP46527 198 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 FXYD2P54710 66 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 MYOZ3Q8TDC0 251 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 COL12A1Q99715 3063 aa10.29□□□□□ -0.76
BCCIP-202ENST00000299130 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.767e-10■□□□□ 9.2
BCCIP-202ENST00000299130 OCIAD2Q56VL3 154 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 CCL19Q99731 98 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 SMIM2Q9BVW6 85 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 OVOL1O14753 267 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 AVPP01185 164 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 GCSHP23434 173 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
BCCIP-202ENST00000299130 S100A4P26447 101 aaKnown RBP10.27□□□□□ -0.77
BCCIP-202ENST00000299130 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 WFDC12Q8WWY7 111 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 A0A087WX48 190 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 ASIPP42127 132 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 SMPXQ9UHP9 88 aa10.27□□□□□ -0.77
BCCIP-202ENST00000299130 K7ERJ3 54 aa10.26□□□□□ -0.77
BCCIP-202ENST00000299130 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
BCCIP-202ENST00000299130 PHLDA3Q9Y5J5 127 aa10.26□□□□□ -0.77
BCCIP-202ENST00000299130 MGPP08493 103 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 SUMO2P61956 95 aaKnown RBP10.25□□□□□ -0.77
BCCIP-202ENST00000299130 DEFB104AQ8WTQ1 72 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 K7EP34 96 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 IGLV1-40P01703 118 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 ATP5J2P56134 94 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 DPH3P1Q9H4G8 78 aa10.25□□□□□ -0.77
BCCIP-202ENST00000299130 C10orf99Q6UWK7 81 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 NEGR1Q7Z3B1 354 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 MUC4Q99102 2169 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 A0A1W2PPM0 123 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
BCCIP-202ENST00000299130 H3BUA1 57 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 SAP30O75446 220 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 NRGNQ92686 78 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
BCCIP-202ENST00000299130 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
BCCIP-202ENST00000299130 BRI3O95415 125 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms