RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NUP35Q8NFH5 326 aa18.05■□□□□ 0.48
GTF2A1-201ENST00000298173 A0A1W2PPQ1 181 aa18.04■□□□□ 0.48
GTF2A1-201ENST00000298173 XKRY2A2RUG3 117 aa18.04■□□□□ 0.48
GTF2A1-201ENST00000298173 KRTAP10-11P60412 298 aa18.04■□□□□ 0.48
GTF2A1-201ENST00000298173 GIG44P09565 113 aaPredicted RBP18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 RBMY1A1P0DJD3 496 aaKnown RBP18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 RBMY1CP0DJD4 496 aa18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 NUTF2P61970 127 aaKnown RBP18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 RBMY1FQ15415 496 aaKnown RBP18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 ANXA2RQ3ZCQ2 193 aa18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 AMBPP02760 352 aa18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 TDRG1Q3Y452 100 aa18.03■□□□□ 0.48
GTF2A1-201ENST00000298173 IGLC6P0CF74 106 aa18.02■□□□□ 0.47
GTF2A1-201ENST00000298173 BTF3L4Q96K17 158 aa18.02■□□□□ 0.47
GTF2A1-201ENST00000298173 MUC21Q5SSG8 566 aa18.01■□□□□ 0.47
GTF2A1-201ENST00000298173 FAM210BQ96KR6 192 aa18.01■□□□□ 0.47
GTF2A1-201ENST00000298173 GRIFINA4D1Z8 144 aa18■□□□□ 0.47
GTF2A1-201ENST00000298173 SAMD5Q5TGI4 173 aa18■□□□□ 0.47
GTF2A1-201ENST00000298173 SREK1IP1Q8N9Q2 155 aaPredicted RBP18■□□□□ 0.47
GTF2A1-201ENST00000298173 C20orf144Q9BQM9 153 aa18■□□□□ 0.47
GTF2A1-201ENST00000298173 TYMSP04818 313 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 RPL35AP18077 110 aaKnown RBP17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 DNLZQ5SXM8 178 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 MORN3Q6PF18 240 aaPredicted RBP17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 SRD5A3Q9H8P0 318 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 XCL2Q9UBD3 114 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 NAGKQ9UJ70 344 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 G3V4G9 280 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 FAM159AQ6UWV7 190 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 KCNS1Q96KK3 526 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 PGLYRP4Q96LB8 373 aa17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 ZMAT5Q9UDW3 170 aaKnown RBP17.99■□□□□ 0.47
GTF2A1-201ENST00000298173 GNRH2O43555 120 aa17.98■□□□□ 0.47
GTF2A1-201ENST00000298173 RAB5AP20339 215 aa17.98■□□□□ 0.47
GTF2A1-201ENST00000298173 SSBP4Q9BWG4 385 aaPredicted RBP17.98■□□□□ 0.47
GTF2A1-201ENST00000298173 IGHV1OR15-1A0A075B7D0 117 aa17.97■□□□□ 0.47
GTF2A1-201ENST00000298173 INSP01308 110 aa17.97■□□□□ 0.47
GTF2A1-201ENST00000298173 FER1L6-AS1Q8NA97 138 aa17.97■□□□□ 0.47
GTF2A1-201ENST00000298173 SPINK4O60575 86 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 FRMD6-AS1P0C7T7 363 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 LYZL1Q6UWQ5 148 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 CTRLP40313 264 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 C1orf158Q8N1D5 194 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 CSNK1G2-AS1Q8NCQ2 148 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 LINC00467Q9BRT7 94 aa17.96■□□□□ 0.47
GTF2A1-201ENST00000298173 KRTAP21-3Q3LHN1 58 aa17.95■□□□□ 0.46
GTF2A1-201ENST00000298173 ATP5L2Q7Z4Y8 100 aa17.94■□□□□ 0.46
GTF2A1-201ENST00000298173 C1QTNF4Q9BXJ3 329 aa17.94■□□□□ 0.46
GTF2A1-201ENST00000298173 CNFNQ9BYD5 112 aa17.94■□□□□ 0.46
GTF2A1-201ENST00000298173 CSTL1Q9H114 145 aa17.94■□□□□ 0.46
GTF2A1-201ENST00000298173 TP53TG3Q9ULZ0 132 aa17.94■□□□□ 0.46
GTF2A1-201ENST00000298173 A0A1B0GXF2 115 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 F2Z2F3 143 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 SNAI2O43623 268 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 OR5AL1P0C617 328 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 A0A1B0GUT8 65 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 ARMS2P0C7Q2 107 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 RNASE3P12724 160 aaKnown RBP17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 ASIPP42127 132 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 MRPL54Q6P161 138 aaKnown RBP17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 TPPP3Q9BW30 176 aa17.93■□□□□ 0.46
GTF2A1-201ENST00000298173 DNAH3Q8TD57 4116 aa17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 LOC102724200A0A096LPH7 203 aaPredicted RBP17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 MED14OSP0DP75 135 aa17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 RASL11AQ6T310 242 aa17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 TMEM256Q8N2U0 113 aa17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 SCRT2Q9NQ03 307 aa17.92■□□□□ 0.46
GTF2A1-201ENST00000298173 LINC01587Q99440 93 aa17.91■□□□□ 0.46
GTF2A1-201ENST00000298173 IGHV3-16A0A0C4DH30 117 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 KIR2DL5BA0A0G2JN68 375 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 KIR2DL5BA0A0G2JPC4 375 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 IGHV4-30-4P0DP06 118 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 RPS10P46783 165 aaKnown RBP17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 WDR73Q6P4I2 378 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 KIR2DL5AQ8N109 375 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 KIR2DL5BQ8NHK3 375 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 H3BVH4 76 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 MDFICQ9P1T7 246 aa17.9■□□□□ 0.46
GTF2A1-201ENST00000298173 MUC4Q99102 2169 aa17.89■□□□□ 0.45
GTF2A1-201ENST00000298173 S100A4P26447 101 aaKnown RBP17.89■□□□□ 0.45
GTF2A1-201ENST00000298173 IGHV4-4A0A075B6R2 117 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 MUC21A0A0G2JKD1 596 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 MUC21A0A140T8X8 626 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 A8MZ25 164 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 PRM2P04554 102 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 RIGQ13278 110 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 COX19Q49B96 90 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 GNB1LQ9BYB4 327 aa17.88■□□□□ 0.45
GTF2A1-201ENST00000298173 TRGV11A0A075B6L2 103 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 CBY3A6NI87 242 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 NTF3P20783 257 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 HBBP68871 147 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 ZNF705AQ6ZN79 300 aaPredicted RBP17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 TMEM136Q6ZRR5 245 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 OR10AG1Q8NH19 301 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 BORCS7Q96B45 105 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 C9orf85Q96MD7 179 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 A0A1B0GW15 77 aa17.87■□□□□ 0.45
GTF2A1-201ENST00000298173 CAMPP49913 170 aa17.86■□□□□ 0.45
GTF2A1-201ENST00000298173 KPRPQ5T749 579 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms