RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CYYR1Q96J86 154 aa13.85□□□□□ -0.19
CDC42EP3-201ENST00000295324 TNFRSF13BO14836 293 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP3-201ENST00000295324 F6UB75 175 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 C2orf82Q6UX34 121 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 LAMTOR3Q9UHA4 124 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 TP53TG1Q9Y2A0 90 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 OBSL1O75147 1896 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 RHOHQ15669 191 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 WIPF2Q8TF74 440 aaPredicted RBP13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 RBAKDNA6NC62 111 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 RITA1Q96K30 269 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
CDC42EP3-201ENST00000295324 CTSGP08311 255 aa13.83□□□□□ -0.19
CDC42EP3-201ENST00000295324 ESDP10768 282 aa13.83□□□□□ -0.19
CDC42EP3-201ENST00000295324 DLX4Q92988 240 aaPredicted RBP13.83□□□□□ -0.19
CDC42EP3-201ENST00000295324 C2orf66Q6UXQ4 117 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 LYPD6Q86Y78 171 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 GAGE6Q13070 117 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 TMEM141Q96I45 108 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 IGHV4OR15-8A0A075B7B6 117 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 A0A087WW49 117 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 hDV102S1A0JD36 115 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 RNF152Q8N8N0 203 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 C11orf52Q96A22 123 aa13.83□□□□□ -0.2
CDC42EP3-201ENST00000295324 CGB3P0DN86 165 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 Q8N8P6 123 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 A0A087X0K7 114 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 MAJINQ3KP22 176 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 ZC2HC1AQ96GY0 325 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 GTSF1LQ9H1H1 148 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 IGKV1-17P01599 117 aa13.82□□□□□ -0.2
CDC42EP3-201ENST00000295324 K7EMT4 169 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 IL15RAQ13261 267 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 ZC2HC1BQ5TFG8 222 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 CDK2AP2O75956 126 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 C17orf77Q96MU5 243 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 IGHV3-38A0A0C4DH36 116 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 A6NDX4 124 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 HLA-DMBP28068 263 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 A0A096LPF7 62 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 DNAJC9-AS1A6NH13 148 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 WFDC11Q8NEX6 87 aa13.81□□□□□ -0.2
CDC42EP3-201ENST00000295324 TMEM131Q92545 1883 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 CRYGCP07315 174 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 SYS1-DBNDD2H3BUS1 97 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 MPV17L2Q567V2 206 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 GPHB5Q86YW7 130 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 U3KQE9 123 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 A8MWP6 167 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
CDC42EP3-201ENST00000295324 LEPROTO15243 131 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 SPART-AS1P0CW21 52 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 C2orf70A6NJV1 201 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 F8WEM9 126 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 ANGP03950 147 aaKnown RBP13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 INSL3P51460 131 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 A0A0J9YY99 117 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 UBE2V1Q13404 147 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
CDC42EP3-201ENST00000295324 MRPL51Q4U2R6 128 aaKnown RBP13.78□□□□□ -0.2
CDC42EP3-201ENST00000295324 CD5LO43866 347 aa13.78□□□□□ -0.2
CDC42EP3-201ENST00000295324 IGHV4-31P0DP07 118 aa13.78□□□□□ -0.2
CDC42EP3-201ENST00000295324 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
CDC42EP3-201ENST00000295324 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
CDC42EP3-201ENST00000295324 BUB3O43684 328 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 FSTL3O95633 263 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 CHAC1Q9BUX1 264 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 TRAV8-3A0A0A6YYJ7 113 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 IGLV2-23P01705 113 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 EML6Q6ZMW3 1958 aa13.77□□□□□ -0.2
CDC42EP3-201ENST00000295324 NCKAP5O14513 1909 aa13.77□□□□□ -0.21
CDC42EP3-201ENST00000295324 IGHV1-24A0A0C4DH33 117 aa13.77□□□□□ -0.21
CDC42EP3-201ENST00000295324 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
CDC42EP3-201ENST00000295324 PMVKQ15126 192 aa13.77□□□□□ -0.21
CDC42EP3-201ENST00000295324 V9GYV3 84 aa13.77□□□□□ -0.21
CDC42EP3-201ENST00000295324 LTAP01374 205 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 SPINK8P0C7L1 97 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 C16orf74Q96GX8 76 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 TEX22C9J3V5 150 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 C9JQL5 133 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 CGB7P0DN87 165 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 ATP5G1P05496 136 aa13.76□□□□□ -0.21
CDC42EP3-201ENST00000295324 Q0VG73 95 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
CDC42EP3-201ENST00000295324 ODF3L1Q8IXM7 274 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms