RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CT83Q5H943 113 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 FOXI2Q6ZQN5 318 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 NUDT10Q8NFP7 164 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 NUDT11Q96G61 164 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 VGLL1Q99990 258 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 MLST8Q9BVC4 326 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 WFDC10AQ9H1F0 79 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 ZNF492Q9P255 531 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 TRAV8-1A0A0A6YYK1 113 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 TRAV34A0A0B4J273 112 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 A0A0J9YX75 114 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 TRBV6-1A0A0K0K1D8 114 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 HIST1H1AQ02539 215 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-201ENST00000293889 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 PRR25Q96S07 402 aa13.17□□□□□ -0.3
CCDC78-201ENST00000293889 DNAH3Q8TD57 4116 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 K7EQM0 130 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 EBLN2Q6P2I7 272 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 AGPAT4-IT1Q9H0P7 198 aa13.16□□□□□ -0.3
CCDC78-201ENST00000293889 F2Z2F3 143 aa13.15□□□□□ -0.3
CCDC78-201ENST00000293889 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
CCDC78-201ENST00000293889 APCSP02743 223 aa13.15□□□□□ -0.3
CCDC78-201ENST00000293889 Q8N1Y9 231 aa13.15□□□□□ -0.3
CCDC78-201ENST00000293889 AGRNO00468 2067 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 A0A1B0GV90 55 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 A0A1B0GXF2 115 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 NPIPB6E9PJ23 425 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-201ENST00000293889 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 C9orf47Q6ZRZ4 202 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 Q8N976 141 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
CCDC78-201ENST00000293889 H3BMM0 161 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 RAB4AP20338 218 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 NUP35Q8NFH5 326 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 ASCL2Q99929 193 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
CCDC78-201ENST00000293889 LTAP01374 205 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 TCL1AP56279 114 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 UBE2G1P62253 170 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 TMEM78Q5T7P6 136 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 Q8TAT8 98 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
CCDC78-201ENST00000293889 M0R143 59 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
CCDC78-201ENST00000293889 IGKV3-20P01619 116 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 SRIP30626 198 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 ZNF138P52744 262 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 MRPL54Q6P161 138 aaKnown RBP13.12□□□□□ -0.31
CCDC78-201ENST00000293889 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 GFRA4Q9GZZ7 299 aa13.12□□□□□ -0.31
CCDC78-201ENST00000293889 Q86TA4 180 aa13.11□□□□□ -0.31
CCDC78-201ENST00000293889 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
CCDC78-201ENST00000293889 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
CCDC78-201ENST00000293889 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 NUTF2P61970 127 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 STHQ8IWL8 128 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 NHLRC2Q8NBF2 726 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 SNHG12Q9BXW3 62 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 A8MTW9 85 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 EREGO14944 169 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 SPINK4O60575 86 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 SLAQ13239 276 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 TRPT1Q86TN4 253 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 NIT1Q86X76 327 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 NEU1Q99519 415 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
CCDC78-201ENST00000293889 PPP1R14DQ9NXH3 145 aa13.1□□□□□ -0.31
CCDC78-201ENST00000293889 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-201ENST00000293889 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
CCDC78-201ENST00000293889 FAM162BQ5T6X4 162 aa13.09□□□□□ -0.31
CCDC78-201ENST00000293889 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
CCDC78-201ENST00000293889 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
CCDC78-201ENST00000293889 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-201ENST00000293889 A8MWL6 223 aa13.08□□□□□ -0.32
CCDC78-201ENST00000293889 CTRLP40313 264 aa13.08□□□□□ -0.32
CCDC78-201ENST00000293889 AMTP48728 403 aa13.08□□□□□ -0.32
CCDC78-201ENST00000293889 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
CCDC78-201ENST00000293889 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
CCDC78-201ENST00000293889 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms