RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
SYNGAP1-201ENST00000293748 RHODO00212 210 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 IFITM1P13164 125 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 A0A087WWL8 130 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 SOCS3O14543 225 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 KLRD1Q13241 179 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 CEND1Q8N111 149 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 RHPN1-AS1Q9BWJ2 59 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 KRTAP10-9P60411 292 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 PRR25Q96S07 402 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 AZU1P20160 251 aa9.41□□□□□ -0.9
SYNGAP1-201ENST00000293748 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
SYNGAP1-201ENST00000293748 FGF6P10767 208 aa9.4□□□□□ -0.9
SYNGAP1-201ENST00000293748 VWC2Q2TAL6 325 aa9.4□□□□□ -0.9
SYNGAP1-201ENST00000293748 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.9
SYNGAP1-201ENST00000293748 A0A1W2PRX2 142 aa9.4□□□□□ -0.91
SYNGAP1-201ENST00000293748 KLF5Q13887 457 aaPredicted RBP9.4□□□□□ -0.91
SYNGAP1-201ENST00000293748 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.91
SYNGAP1-201ENST00000293748 ZNF625Q96I27 306 aaPredicted RBP9.4□□□□□ -0.91
SYNGAP1-201ENST00000293748 DMXL2Q8TDJ6 3036 aa9.4□□□□□ -0.91
SYNGAP1-201ENST00000293748 H3BMG7 143 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRR20EP86478 221 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRR20CP86479 221 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRR20DP86480 221 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRR20BP86481 221 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRR20AP86496 221 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 TMEM219Q86XT9 240 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 DAZ1Q9NQZ3 744 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 INSP01308 110 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 PTPN13Q12923 2485 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 IGHV2-70DA0A0C4DH43 119 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 ZNF747Q9BV97 191 aa9.39□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 RNF223E7ERA6 249 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE7O76087 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE12FP0CL80 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE12GP0CL81 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE12IP0CL82 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE4Q13068 117 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.912e-16■■■□□ 15.2
SYNGAP1-201ENST00000293748 NPYP01303 97 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 GATA4P43694 442 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 FAM110DQ8TAY7 271 aaPredicted RBP9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 H3BUX3 64 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
SYNGAP1-201ENST00000293748 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 IGLV3-1P01715 115 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 LYPD2Q6UXB3 125 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 IL17RELQ6ZVW7 336 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 LINC00311Q8N616 119 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 OVOL3O00110 214 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 C12orf74Q32Q52 190 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 C11orf71Q6IPW1 123 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 DNAH14Q0VDD8 3507 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 H3BRN7 92 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 I3L3M4 83 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 NDUFS7O75251 213 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 CITED1Q99966 193 aa9.37□□□□□ -0.91
SYNGAP1-201ENST00000293748 HELZ2Q9BYK8 2649 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 Q8TCH9 128 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 USF3Q68DE3 2245 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 B4DSR2 109 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 BPESC1Q9GZL8 116 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 NDUFA12Q9UI09 145 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 SS18Q15532 418 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 RSPO1Q2MKA7 263 aaPredicted RBP9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 Q8NFD4 153 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 K7EN84 100 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 CCL25O15444 150 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 ZC2HC1AQ96GY0 325 aa9.36□□□□□ -0.91
SYNGAP1-201ENST00000293748 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
SYNGAP1-201ENST00000293748 J3QQQ9 107 aa9.35□□□□□ -0.91
SYNGAP1-201ENST00000293748 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
SYNGAP1-201ENST00000293748 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
SYNGAP1-201ENST00000293748 C15orf65H3BRN8 121 aa9.35□□□□□ -0.91
SYNGAP1-201ENST00000293748 K7EMI3 77 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms