RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 NUP35Q8NFH5 326 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 KIR2DL5BQ8NHK3 375 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 TGP01266 2768 aa11.28□□□□□ -0.6
NCK1-201ENST00000288986 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.6
NCK1-201ENST00000288986 CRISP2P16562 243 aa11.27□□□□□ -0.6
NCK1-201ENST00000288986 TCL1AP56279 114 aa11.27□□□□□ -0.6
NCK1-201ENST00000288986 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.6
NCK1-201ENST00000288986 ZMAT4Q9H898 229 aa11.27□□□□□ -0.6
NCK1-201ENST00000288986 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 DNAH9Q9NYC9 4486 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 TRGC2P03986 189 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 RAB5BP61020 215 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
NCK1-201ENST00000288986 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 ODF3Q96PU9 254 aa11.27□□□□□ -0.61
NCK1-201ENST00000288986 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
NCK1-201ENST00000288986 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
NCK1-201ENST00000288986 UBE2CO00762 179 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
NCK1-201ENST00000288986 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 A8MTW9 85 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 COX19Q49B96 90 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 PRR9Q5T870 116 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
NCK1-201ENST00000288986 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
NCK1-201ENST00000288986 A0A1B0GXF2 115 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 KLLNB2CW77 178 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 FXYD7P58549 80 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
NCK1-201ENST00000288986 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 GNB1LQ9BYB4 327 aa11.24□□□□□ -0.61
NCK1-201ENST00000288986 GZMBP10144 247 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 Q6AWC8 147 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 Q6ZWC4 215 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 FRZBQ92765 325 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 RETNQ9HD89 108 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
NCK1-201ENST00000288986 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
NCK1-201ENST00000288986 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
NCK1-201ENST00000288986 IGLC6P0CF74 106 aa11.22□□□□□ -0.61
NCK1-201ENST00000288986 MRPL54Q6P161 138 aaKnown RBP11.22□□□□□ -0.61
NCK1-201ENST00000288986 TMEM136Q6ZRR5 245 aa11.22□□□□□ -0.61
NCK1-201ENST00000288986 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
NCK1-201ENST00000288986 SPINK4O60575 86 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 MT-ND6P03923 174 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
NCK1-201ENST00000288986 WDR73Q6P4I2 378 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 PGLYRP4Q96LB8 373 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 TRAPPC1Q9Y5R8 145 aa11.21□□□□□ -0.61
NCK1-201ENST00000288986 HUWE1Q7Z6Z7 4374 aaKnown RBP11.21□□□□□ -0.62
NCK1-201ENST00000288986 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.62
NCK1-201ENST00000288986 SPRY2O43597 315 aa11.21□□□□□ -0.62
NCK1-201ENST00000288986 TRGC1P0CF51 173 aa11.21□□□□□ -0.62
NCK1-201ENST00000288986 FABP9Q0Z7S8 132 aa11.21□□□□□ -0.62
NCK1-201ENST00000288986 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 M0R2Z0 102 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 ORM1P02763 201 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 GPX1P07203 203 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 CTRLP40313 264 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 SPINK13Q1W4C9 94 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 Q6ZQT7 251 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 RNF183Q96D59 192 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
NCK1-201ENST00000288986 LEPP41159 167 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 KIR3DS1Q14943 382 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 HBBP68871 147 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 U3KQK5 164 aa11.19□□□□□ -0.62
NCK1-201ENST00000288986 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
NCK1-201ENST00000288986 CSNK1G2-AS1Q8NCQ2 148 aa11.18□□□□□ -0.62
NCK1-201ENST00000288986 MRPL18Q9H0U6 180 aaKnown RBP11.18□□□□□ -0.62
NCK1-201ENST00000288986 TENM3Q9P273 2699 aa11.18□□□□□ -0.62
NCK1-201ENST00000288986 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms