RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 DUX3Q96PT4 197 aa7.61□□□□□ -1.19
C9orf43-201ENST00000288462 SMR3AQ99954 134 aa7.61□□□□□ -1.19
C9orf43-201ENST00000288462 MSRB1Q9NZV6 116 aa7.61□□□□□ -1.19
C9orf43-201ENST00000288462 J3KRW8 73 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 CSN3P07498 182 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 MED14OSP0DP75 135 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 DLX4Q92988 240 aaPredicted RBP7.6□□□□□ -1.19
C9orf43-201ENST00000288462 NAGKQ9UJ70 344 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 D6R8Y8 96 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 NDUFA7O95182 113 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 LY6G6DO95868 133 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 CD28P10747 220 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 RNASE4P34096 147 aaKnown RBP7.6□□□□□ -1.19
C9orf43-201ENST00000288462 SSTP61278 116 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 CACNG7P62955 275 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 ORMDL3Q8N138 153 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 RNF185Q96GF1 192 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 RAX2Q96IS3 184 aa7.6□□□□□ -1.19
C9orf43-201ENST00000288462 H3BVH4 76 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 LEPP41159 167 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 ANXA2RQ3ZCQ2 193 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 HIST2H2BDQ6DRA6 164 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 FOXI2Q6ZQN5 318 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
C9orf43-201ENST00000288462 M0R2Z0 102 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 SCGB1D1O95968 90 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 LINC00614P0C842 121 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 CD33P20138 364 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 CTAG1AP78358 180 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 EBLN2Q6P2I7 272 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 Q8N976 141 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 PRELID3AQ96N28 172 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 C7orf71A4D174 169 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 A8MTW9 85 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 DUSP14O95147 198 aaKnown RBP7.58□□□□□ -1.2
C9orf43-201ENST00000288462 RAB4AP20338 218 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 ASIPP42127 132 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
C9orf43-201ENST00000288462 CITED2Q99967 270 aaPredicted RBP7.58□□□□□ -1.2
C9orf43-201ENST00000288462 TSSC4Q9Y5U2 329 aaPredicted RBP7.58□□□□□ -1.2
C9orf43-201ENST00000288462 NF1P21359 2839 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 PPBPP02775 128 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 KRTDAPP60985 99 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 CUBNO60494 3623 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 CCL24O00175 119 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 NXPH4O95158 308 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 C3orf79P0CE67 100 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 PKIAP61925 76 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 DEFB114Q30KQ6 69 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 TEX43Q6ZNM6 134 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 C11orf44Q8N8P7 122 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 DYNLRB2Q8TF09 96 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
C9orf43-201ENST00000288462 MTORP42345 2549 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 A0A1W2PRX2 142 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 NCR2O95944 276 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 NPYP01303 97 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 TSPOP30536 169 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 CKS2P33552 79 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 SPANXN1Q5VSR9 72 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 SIGLEC8Q9NYZ4 499 aa7.56□□□□□ -1.2
C9orf43-201ENST00000288462 SMKR1H3BMG3 65 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
C9orf43-201ENST00000288462 EVI2AP22794 236 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 CDKN1BP46527 198 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 PROK1P58294 105 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 ZNF664Q8N3J9 261 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 TRAV12-3A0A0B4J271 114 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 TRAV25A0A0B4J276 109 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 TSTD3H0UI37 97 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 GNRH2O43555 120 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 HLA-DRB4P13762 266 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
C9orf43-201ENST00000288462 PMCHL1Q16048 86 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 FAM159AQ6UWV7 190 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 SPAG8Q99932 426 aaPredicted RBP7.55□□□□□ -1.2
C9orf43-201ENST00000288462 HLA-DRB4X5D2U9 266 aa7.55□□□□□ -1.2
C9orf43-201ENST00000288462 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 KIR2DL5BA0A0G2JN68 375 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 KIR2DL5BA0A0G2JPC4 375 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 ADARB2-AS1A8MUL3 147 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 TCF21O43680 179 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 IGKV3-20P01619 116 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 IFI27P40305 119 aaPredicted RBP7.54□□□□□ -1.2
C9orf43-201ENST00000288462 DEFB131AP59861 70 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
C9orf43-201ENST00000288462 CD300EQ496F6 205 aaPredicted RBP7.54□□□□□ -1.2
C9orf43-201ENST00000288462 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms