RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 A0A096LPF7 62 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 A0A0D9SG52 128 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 M0R2P5 195 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 ESRGQ1W209 222 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 TTC32Q5I0X7 151 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 SGK494Q96LW2 274 aa13.13□□□□□ -0.31
MALSU1-201ENST00000287543 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
MALSU1-201ENST00000287543 GNRH2O43555 120 aa13.12□□□□□ -0.31
MALSU1-201ENST00000287543 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
MALSU1-201ENST00000287543 CRYBA4P53673 196 aa13.12□□□□□ -0.31
MALSU1-201ENST00000287543 EIF5AP63241 154 aaKnown RBP13.12□□□□□ -0.31
MALSU1-201ENST00000287543 FHL2Q14192 279 aa13.12□□□□□ -0.31
MALSU1-201ENST00000287543 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
MALSU1-201ENST00000287543 HIST1H2BAQ96A08 127 aa13.12□□□□□ -0.31
MALSU1-201ENST00000287543 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 SMLR1H3BR10 107 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 GCGP01275 180 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 IGLV2-11P01706 119 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 TYMSP04818 313 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
MALSU1-201ENST00000287543 TCEAL7Q9BRU2 100 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
MALSU1-201ENST00000287543 TRAV4A0A0B4J268 109 aa13.1□□□□□ -0.31
MALSU1-201ENST00000287543 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
MALSU1-201ENST00000287543 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
MALSU1-201ENST00000287543 SEC11BP0C7V7 166 aa13.1□□□□□ -0.31
MALSU1-201ENST00000287543 BTF3P20290 206 aaKnown RBP13.1□□□□□ -0.31
MALSU1-201ENST00000287543 C6orf223Q8N319 242 aa13.1□□□□□ -0.31
MALSU1-201ENST00000287543 A0A1B0GVY2 172 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 PEX7O00628 323 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 CIDEAO60543 219 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 ORM1P02763 201 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
MALSU1-201ENST00000287543 UBE2G2P60604 165 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 OR4C5Q8NGB2 326 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 PCNPQ8WW12 178 aaKnown RBP13.09□□□□□ -0.31
MALSU1-201ENST00000287543 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
MALSU1-201ENST00000287543 FHITP49789 147 aa13.08□□□□□ -0.32
MALSU1-201ENST00000287543 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
MALSU1-201ENST00000287543 ARL2-SNX15V9GYD0 113 aa13.08□□□□□ -0.32
MALSU1-201ENST00000287543 BCL2L11O43521 198 aa13.07□□□□□ -0.32
MALSU1-201ENST00000287543 ZNF80P51504 273 aaPredicted RBP13.07□□□□□ -0.32
MALSU1-201ENST00000287543 DPPA3Q6W0C5 159 aa13.07□□□□□ -0.32
MALSU1-201ENST00000287543 NEGR1Q7Z3B1 354 aa13.07□□□□□ -0.32
MALSU1-201ENST00000287543 PTH2Q96A98 100 aa13.07□□□□□ -0.32
MALSU1-201ENST00000287543 ZNF471Q9BX82 626 aaPredicted RBP13.07□□□□□ -0.32
MALSU1-201ENST00000287543 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
MALSU1-201ENST00000287543 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
MALSU1-201ENST00000287543 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
MALSU1-201ENST00000287543 LINC00479Q96M42 142 aa13.06□□□□□ -0.32
MALSU1-201ENST00000287543 FRAS1Q86XX4 4008 aa13.06□□□□□ -0.32
MALSU1-201ENST00000287543 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 C9JCJ5 164 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 SRIP30626 198 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 MBD3L1Q8WWY6 194 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 FMC1Q96HJ9 113 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
MALSU1-201ENST00000287543 PFDN1O60925 122 aa13.04□□□□□ -0.32
MALSU1-201ENST00000287543 UBE2G1P62253 170 aa13.04□□□□□ -0.32
MALSU1-201ENST00000287543 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
MALSU1-201ENST00000287543 SFT2D1Q8WV19 159 aa13.04□□□□□ -0.32
MALSU1-201ENST00000287543 C11orf21Q9P2W6 132 aa13.04□□□□□ -0.32
MALSU1-201ENST00000287543 DNAH2Q9P225 4427 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 TRBV6-1A0A0K0K1D8 114 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 K7EQD1 137 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 SIVA1O15304 175 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 S100A4P26447 101 aaKnown RBP13.03□□□□□ -0.32
MALSU1-201ENST00000287543 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
MALSU1-201ENST00000287543 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 Q86TA4 180 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 FAM213BQ8TBF2 198 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
MALSU1-201ENST00000287543 S100A9P06702 114 aaKnown RBP13.02□□□□□ -0.33
MALSU1-201ENST00000287543 TPT1P13693 172 aaKnown RBP13.02□□□□□ -0.33
MALSU1-201ENST00000287543 GYPEP15421 78 aa13.02□□□□□ -0.33
MALSU1-201ENST00000287543 PIK3CD-AS1Q5SR53 167 aa13.02□□□□□ -0.33
MALSU1-201ENST00000287543 EIF5AL1Q6IS14 154 aaKnown RBP13.02□□□□□ -0.33
MALSU1-201ENST00000287543 TMUB2Q71RG4 321 aa13.02□□□□□ -0.33
MALSU1-201ENST00000287543 RS1O15537 224 aa13.01□□□□□ -0.33
MALSU1-201ENST00000287543 NXPH4O95158 308 aa13.01□□□□□ -0.33
MALSU1-201ENST00000287543 TRAV9-2A0A087WT02 112 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 K7EP13 123 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 GATA1P15976 413 aaPredicted RBP13□□□□□ -0.33
MALSU1-201ENST00000287543 ASIPP42127 132 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 FAM162BQ5T6X4 162 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 PRADC1Q9BSG0 188 aa13□□□□□ -0.33
MALSU1-201ENST00000287543 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
MALSU1-201ENST00000287543 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
MALSU1-201ENST00000287543 PAGE4O60829 102 aa12.99□□□□□ -0.33
MALSU1-201ENST00000287543 RNASE3P12724 160 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms