RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TRAV12-3A0A0B4J271 114 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 HIGD1CA8MV81 97 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 AMBPP02760 352 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 GZMBP10144 247 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 MORN3Q6PF18 240 aaPredicted RBP13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 NUP35Q8NFH5 326 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 C11orf21Q9P2W6 132 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 NAT8BQ9UHF3 227 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 TMEM189A5PLL7 270 aa13.85□□□□□ -0.19
PDLIM3-202ENST00000284770 ZNF324O75467 553 aaPredicted RBP13.85□□□□□ -0.19
PDLIM3-202ENST00000284770 RPS10P46783 165 aaKnown RBP13.84□□□□□ -0.19
PDLIM3-202ENST00000284770 FOXA3P55318 350 aaPredicted RBP13.84□□□□□ -0.19
PDLIM3-202ENST00000284770 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
PDLIM3-202ENST00000284770 TMA7Q9Y2S6 64 aaKnown RBP13.84□□□□□ -0.19
PDLIM3-202ENST00000284770 GIG44P09565 113 aaPredicted RBP13.83□□□□□ -0.19
PDLIM3-202ENST00000284770 IGHV4-30-4P0DP06 118 aa13.83□□□□□ -0.19
PDLIM3-202ENST00000284770 XCL2Q9UBD3 114 aa13.83□□□□□ -0.19
PDLIM3-202ENST00000284770 LOC102724200A0A096LPH7 203 aaPredicted RBP13.83□□□□□ -0.2
PDLIM3-202ENST00000284770 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
PDLIM3-202ENST00000284770 ORM1P02763 201 aa13.83□□□□□ -0.2
PDLIM3-202ENST00000284770 CSTL1Q9H114 145 aa13.83□□□□□ -0.2
PDLIM3-202ENST00000284770 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
PDLIM3-202ENST00000284770 C20orf144Q9BQM9 153 aa13.82□□□□□ -0.2
PDLIM3-202ENST00000284770 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
PDLIM3-202ENST00000284770 XKRY2A2RUG3 117 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 SPINK4O60575 86 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 INSP01308 110 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 RBMY1A1P0DJD3 496 aaKnown RBP13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 RBMY1CP0DJD4 496 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 RPS20P60866 119 aaKnown RBP13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 NAGKQ9UJ70 344 aa13.81□□□□□ -0.2
PDLIM3-202ENST00000284770 KIR2DL5BA0A0G2JN68 375 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 KIR2DL5BA0A0G2JPC4 375 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 A8MZ25 164 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 MUC21Q5SSG8 566 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 KIR2DL5AQ8N109 375 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 KIR2DL5BQ8NHK3 375 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 MGAM2Q2M2H8 2515 aa13.8□□□□□ -0.2
PDLIM3-202ENST00000284770 IGLC6P0CF74 106 aa13.79□□□□□ -0.2
PDLIM3-202ENST00000284770 ANXA2RQ3ZCQ2 193 aa13.79□□□□□ -0.2
PDLIM3-202ENST00000284770 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
PDLIM3-202ENST00000284770 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
PDLIM3-202ENST00000284770 PHOX2AO14813 284 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 APOC4P55056 127 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 CSNK1G2-AS1Q8NCQ2 148 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 A0A1B0GXF2 115 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 TRGC2P03986 189 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 KCNS1Q96KK3 526 aa13.78□□□□□ -0.2
PDLIM3-202ENST00000284770 IGHV1OR15-1A0A075B7D0 117 aa13.77□□□□□ -0.21
PDLIM3-202ENST00000284770 GRIFINA4D1Z8 144 aa13.77□□□□□ -0.21
PDLIM3-202ENST00000284770 RASL11AQ6T310 242 aa13.77□□□□□ -0.21
PDLIM3-202ENST00000284770 C1orf158Q8N1D5 194 aa13.77□□□□□ -0.21
PDLIM3-202ENST00000284770 TMEM256Q8N2U0 113 aa13.77□□□□□ -0.21
PDLIM3-202ENST00000284770 C1orf196B1AJZ1 125 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 CTRLP40313 264 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 LYZL1Q6UWQ5 148 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 LINC01587Q99440 93 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 TMEM136Q6ZRR5 245 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 FER1L6-AS1Q8NA97 138 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 TMEM208Q9BTX3 173 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 GNB1LQ9BYB4 327 aa13.76□□□□□ -0.21
PDLIM3-202ENST00000284770 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 COX19Q49B96 90 aa13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 NOTCH1P46531 2555 aa13.75□□□□□ -0.21
PDLIM3-202ENST00000284770 GNRH2O43555 120 aa13.74□□□□□ -0.21
PDLIM3-202ENST00000284770 WDR73Q6P4I2 378 aa13.74□□□□□ -0.21
PDLIM3-202ENST00000284770 DNAH3Q8TD57 4116 aa13.74□□□□□ -0.21
PDLIM3-202ENST00000284770 DNHD1Q96M86 4753 aa13.74□□□□□ -0.21
PDLIM3-202ENST00000284770 NBEAL1Q6ZS30 2694 aa13.74□□□□□ -0.21
PDLIM3-202ENST00000284770 IGHV3OR16-12A0A075B7B8 117 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 SNURFLB1AK76 121 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 UBE2CO00762 179 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 HTN1P15515 57 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 HBBP68871 147 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 ZFP82Q8N141 532 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 CNFNQ9BYD5 112 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 TP53TG3Q9ULZ0 132 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 RAB5BP61020 215 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 FABP9Q0Z7S8 132 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 DNLZQ5SXM8 178 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 FRZBQ92765 325 aa13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 SSBP4Q9BWG4 385 aaPredicted RBP13.73□□□□□ -0.21
PDLIM3-202ENST00000284770 CBY3A6NI87 242 aa13.72□□□□□ -0.21
PDLIM3-202ENST00000284770 MT-ND6P03923 174 aa13.72□□□□□ -0.21
PDLIM3-202ENST00000284770 ASIPP42127 132 aa13.72□□□□□ -0.21
PDLIM3-202ENST00000284770 CAMPP49913 170 aa13.72□□□□□ -0.21
PDLIM3-202ENST00000284770 F2Z2F3 143 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms