RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SERTM2A0A1B0GWG4 89 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 APOC3P02656 99 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 H2AFB1P0C5Y9 115 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 HOXA5P20719 270 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 FHITP49789 147 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 TMEM183BQ1AE95 376 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 SVBPQ8N300 66 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 TVP23CQ96ET8 276 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 SEC11CQ9BY50 192 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
CT55-201ENST00000276241 CARHSP1Q9Y2V2 147 aaKnown RBP9.55□□□□□ -0.88
CT55-201ENST00000276241 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
CT55-201ENST00000276241 IGLV2-18A0A075B6J9 118 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 A0A1W2PRE2 83 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 F8W036 122 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 SPINK4O60575 86 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 C8orf49Q96NF6 230 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 EPDR1Q9UM22 224 aa9.54□□□□□ -0.88
CT55-201ENST00000276241 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 TRAV21A0A0B4J279 112 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 M0R2N4 97 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 IGHV3-53P01767 116 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
CT55-201ENST00000276241 PRNTQ86SH4 94 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
CT55-201ENST00000276241 A0A1B0GV50 99 aa9.52□□□□□ -0.89
CT55-201ENST00000276241 FAM74A7A6NL05 159 aa9.52□□□□□ -0.89
CT55-201ENST00000276241 SFTA3P0C7M3 94 aa9.52□□□□□ -0.89
CT55-201ENST00000276241 FLI1Q01543 452 aaPredicted RBP9.52□□□□□ -0.89
CT55-201ENST00000276241 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.89
CT55-201ENST00000276241 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
CT55-201ENST00000276241 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 SCO1O75880 301 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 SNAPINO95295 136 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 RNF212Q495C1 297 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
CT55-201ENST00000276241 PEX7O00628 323 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 GNRH2O43555 120 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 GCGP01275 180 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 TYMSP04818 313 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
CT55-201ENST00000276241 MBD3L1Q8WWY6 194 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 NKX6-2Q9C056 277 aaPredicted RBP9.5□□□□□ -0.89
CT55-201ENST00000276241 SDF2L1Q9HCN8 221 aa9.5□□□□□ -0.89
CT55-201ENST00000276241 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 PPT1P50897 306 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 TDRG1Q3Y452 100 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 SMUG1Q53HV7 270 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 CST9LP1Q5W188 147 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 Q86TA4 180 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 C18orf15Q96N68 181 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 ARL2-SNX15V9GYD0 113 aa9.49□□□□□ -0.89
CT55-201ENST00000276241 IGHV3-16A0A0C4DH30 117 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 IFNA1P01562 189 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
CT55-201ENST00000276241 CCL18P55774 89 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 KCNS1Q96KK3 526 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
CT55-201ENST00000276241 TAGLN2P37802 199 aaKnown RBP9.48□□□□□ -0.89
CT55-201ENST00000276241 SAPCD1Q5SSQ6 148 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 HIST1H2BAQ96A08 127 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 SPXQ9BT56 116 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 LINC00588Q9Y4M8 146 aa9.48□□□□□ -0.89
CT55-201ENST00000276241 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
CT55-201ENST00000276241 PAGE4O60829 102 aa9.47□□□□□ -0.89
CT55-201ENST00000276241 UBE2G1P62253 170 aa9.47□□□□□ -0.89
CT55-201ENST00000276241 CCL20P78556 96 aa9.47□□□□□ -0.89
CT55-201ENST00000276241 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
CT55-201ENST00000276241 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 C9JQL5 133 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 H3BNG1 76 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 PAX4O43316 350 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 BCL2P10415 239 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 AKR1C3P42330 323 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 FAM3BP58499 235 aaPredicted RBP9.46□□□□□ -0.9
CT55-201ENST00000276241 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 ZNF479Q96JC4 524 aa9.46□□□□□ -0.9
CT55-201ENST00000276241 M0R2P5 195 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 SOHLH1Q5JUK2 328 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
CT55-201ENST00000276241 ZNRF2Q8NHG8 242 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 RASL10AQ92737 203 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
CT55-201ENST00000276241 GNG13Q9P2W3 67 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms