RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 IQCF2Q8IXL9 164 aa9.96□□□□□ -0.82
HMGN3-201ENST00000275036 C11orf21Q9P2W6 132 aa9.96□□□□□ -0.82
HMGN3-201ENST00000275036 EPDR1Q9UM22 224 aa9.96□□□□□ -0.82
HMGN3-201ENST00000275036 PSG8Q9UQ74 426 aa9.96□□□□□ -0.82
HMGN3-201ENST00000275036 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 A0A1W2PRE2 83 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 TAAR5O14804 337 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 TYMSP04818 313 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 SFTA3P0C7M3 94 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 FGF8P55075 233 aaPredicted RBP9.95□□□□□ -0.82
HMGN3-201ENST00000275036 TNP2Q05952 138 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 OR11H4Q8NGC9 324 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 RASL10AQ92737 203 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 SPXQ9BT56 116 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 Q9H8V8 135 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 HSPG2P98160 4391 aa9.95□□□□□ -0.82
HMGN3-201ENST00000275036 PAX4O43316 350 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 CRYBA4P53673 196 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 UBE2G2P60604 165 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 FLI1Q01543 452 aaPredicted RBP9.94□□□□□ -0.82
HMGN3-201ENST00000275036 AKR1C8PQ5T2L2 129 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 CYB561D1Q8N8Q1 229 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 LINC00479Q96M42 142 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
HMGN3-201ENST00000275036 MRPS16Q9Y3D3 137 aaKnown RBP9.94□□□□□ -0.82
HMGN3-201ENST00000275036 TRAV34A0A0B4J273 112 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 GCGP01275 180 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 SOHLH1Q5JUK2 328 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 PRNTQ86SH4 94 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 C6orf223Q8N319 242 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 NDFIP1Q9BT67 221 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
HMGN3-201ENST00000275036 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
HMGN3-201ENST00000275036 FAM74A7A6NL05 159 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 K7EQM0 130 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 FHITP49789 147 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 ZNF345Q14585 488 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
HMGN3-201ENST00000275036 TRGV4A0A0C4DH28 118 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 MAP1LC3B2A6NCE7 125 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 M0R2P5 195 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 KCNS1Q96KK3 526 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 MAP1LC3BQ9GZQ8 125 aa9.91□□□□□ -0.82
HMGN3-201ENST00000275036 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 PEX7O00628 323 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
HMGN3-201ENST00000275036 SLAQ13239 276 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 SMUG1Q53HV7 270 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 ARL2-SNX15V9GYD0 113 aa9.9□□□□□ -0.82
HMGN3-201ENST00000275036 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
HMGN3-201ENST00000275036 K7EQD1 137 aa9.89□□□□□ -0.83
HMGN3-201ENST00000275036 IFNA7P01567 189 aa9.89□□□□□ -0.83
HMGN3-201ENST00000275036 DPPA3Q6W0C5 159 aa9.89□□□□□ -0.83
HMGN3-201ENST00000275036 Q86TA4 180 aa9.89□□□□□ -0.83
HMGN3-201ENST00000275036 MRPL23Q16540 153 aaKnown RBP9.88□□□□□ -0.83
HMGN3-201ENST00000275036 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
HMGN3-201ENST00000275036 SAPCD1Q5SSQ6 148 aa9.88□□□□□ -0.83
HMGN3-201ENST00000275036 LYPD5Q6UWN5 251 aa9.88□□□□□ -0.83
HMGN3-201ENST00000275036 OR4C5Q8NGB2 326 aa9.88□□□□□ -0.83
HMGN3-201ENST00000275036 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
HMGN3-201ENST00000275036 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 A0A0D9SG52 128 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 LOC100131303A0A0U1RQF7 123 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 C9JCJ5 164 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 BCL2L11O43521 198 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 NXPH4O95158 308 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 RNASE3P12724 160 aaKnown RBP9.87□□□□□ -0.83
HMGN3-201ENST00000275036 GYPEP15421 78 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 TTC32Q5I0X7 151 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 HIST1H2BAQ96A08 127 aa9.87□□□□□ -0.83
HMGN3-201ENST00000275036 ZNF471Q9BX82 626 aaPredicted RBP9.87□□□□□ -0.83
HMGN3-201ENST00000275036 NKX6-2Q9C056 277 aaPredicted RBP9.87□□□□□ -0.83
HMGN3-201ENST00000275036 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 SIVA1O15304 175 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
HMGN3-201ENST00000275036 CRIP1P50238 77 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 ZNF876PQ49A33 203 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
HMGN3-201ENST00000275036 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 RS1O15537 224 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 SRIP30626 198 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 PPT1P50897 306 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 CFAP126Q5VTH2 177 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 FAM213BQ8TBF2 198 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 MBD3L1Q8WWY6 194 aa9.85□□□□□ -0.83
HMGN3-201ENST00000275036 A0A1B0GV50 99 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 FABP5P3A8MUU1 101 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms