RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 PPBPP02775 128 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
CNOT9-201ENST00000273064 IGKCP01834 107 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 PAX1P15863 534 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 RAX2Q96IS3 184 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 CSTL1Q9H114 145 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 DAZ1Q9NQZ3 744 aaKnown RBP11.35□□□□□ -0.59
CNOT9-201ENST00000273064 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 K7ERU9 68 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 SMIM13P0DJ93 91 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-201ENST00000273064 ZNF418Q8TF45 676 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-201ENST00000273064 DEFB131AP59861 70 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
CNOT9-201ENST00000273064 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
CNOT9-201ENST00000273064 TNFRSF18Q9Y5U5 241 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 LRBAP50851 2863 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 CRYGCP07315 174 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 LAGE3Q14657 143 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 J3QR89 54 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
CNOT9-201ENST00000273064 NPC2P61916 151 aa11.34□□□□□ -0.59
CNOT9-201ENST00000273064 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
CNOT9-201ENST00000273064 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 IGHV3-16A0A0C4DH30 117 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 OVOL1O14753 267 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 BUB3O43684 328 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 CT83Q5H943 113 aa11.33□□□□□ -0.6
CNOT9-201ENST00000273064 PHLDA1Q8WV24 401 aaPredicted RBP11.33□□□□□ -0.6
CNOT9-201ENST00000273064 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
CNOT9-201ENST00000273064 CFAP46Q8IYW2 2715 aa11.32□□□□□ -0.6
CNOT9-201ENST00000273064 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
CNOT9-201ENST00000273064 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
CNOT9-201ENST00000273064 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
CNOT9-201ENST00000273064 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
CNOT9-201ENST00000273064 CRXO43186 299 aaPredicted RBP11.31□□□□□ -0.6
CNOT9-201ENST00000273064 IGF1P05019 195 aa11.31□□□□□ -0.6
CNOT9-201ENST00000273064 RRN3P1Q2M238 152 aa11.31□□□□□ -0.6
CNOT9-201ENST00000273064 CHTOPQ9Y3Y2 248 aaKnown RBP11.31□□□□□ -0.6
CNOT9-201ENST00000273064 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
CNOT9-201ENST00000273064 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
CNOT9-201ENST00000273064 GEMIN7Q9H840 131 aaKnown RBP11.31□□□□□ -0.6
CNOT9-201ENST00000273064 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
CNOT9-201ENST00000273064 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 MRPL35Q9NZE8 188 aaKnown RBP11.3□□□□□ -0.6
CNOT9-201ENST00000273064 LMO4P61968 165 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 ZNF747Q9BV97 191 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 FAM231BA6NCW3 169 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
CNOT9-201ENST00000273064 NPBQ8NG41 125 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 AJUBAQ96IF1 538 aa11.3□□□□□ -0.6
CNOT9-201ENST00000273064 LAMA5O15230 3695 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 AGRNO00468 2067 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 KIR2DL5BA0A0G2JN68 375 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 KIR2DL5BA0A0G2JPC4 375 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 ANKRD39Q53RE8 183 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 KIR2DL5AQ8N109 375 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 Q96MF0 132 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
CNOT9-201ENST00000273064 Q5PR19 223 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 KIR3DS1Q14943 382 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 USMG5Q96IX5 58 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 VCX2Q9H322 139 aa11.29□□□□□ -0.6
CNOT9-201ENST00000273064 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
CNOT9-201ENST00000273064 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
CNOT9-201ENST00000273064 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
CNOT9-201ENST00000273064 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
CNOT9-201ENST00000273064 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
CNOT9-201ENST00000273064 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
CNOT9-201ENST00000273064 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
CNOT9-201ENST00000273064 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
CNOT9-201ENST00000273064 TCTEX1D4Q5JR98 221 aa11.27□□□□□ -0.6
CNOT9-201ENST00000273064 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.6
CNOT9-201ENST00000273064 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 HIST2H2BCQ6DN03 193 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 Q6ZQT7 251 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 TRAV2A0A0B4J234 112 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 HTN3P15516 51 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 CRIP1P50238 77 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 COX11Q9Y6N1 276 aa11.27□□□□□ -0.61
CNOT9-201ENST00000273064 PTPRBP23467 1997 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms