RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SIGLEC15Q6ZMC9 328 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 HIGD1AQ9Y241 93 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 A0A1W2PPI3 338 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 IGHG4P01861 327 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 KLK5Q9Y337 293 aaPredicted RBP12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 SPTA1P02549 2419 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 TRBV6-1A0A0K0K1D8 114 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 B9A039 149 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 ELANEP08246 267 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 CFC1P0CG37 223 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 PLNP26678 52 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 RNF7Q9UBF6 113 aa12.16□□□□□ -0.46
CTDSP1-201ENST00000273062 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 ZNF80P51504 273 aaPredicted RBP12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 MYOZ3Q8TDC0 251 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 TMEM126AQ9H061 195 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 GATA4P43694 442 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 ADIPOQQ15848 244 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 GAFA1Q96PS6 74 aa12.15□□□□□ -0.46
CTDSP1-201ENST00000273062 SLC25A16P16260 332 aa12.14□□□□□ -0.47
CTDSP1-201ENST00000273062 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
CTDSP1-201ENST00000273062 ATRXP46100 2492 aa12.14□□□□□ -0.47
CTDSP1-201ENST00000273062 Q8TAT8 98 aa12.14□□□□□ -0.47
CTDSP1-201ENST00000273062 F8VRH5 84 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 LYRM7Q5U5X0 104 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 Q6ZS46 218 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 K7ENP7 123 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 Q8N8P6 123 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
CTDSP1-201ENST00000273062 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 PRR25Q96S07 402 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 MRPS12O15235 138 aaKnown RBP12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
CTDSP1-201ENST00000273062 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 H7C2G1 150 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 H7C1H1 209 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 TRGV3P03979 118 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 COX6B1P14854 86 aa12.11□□□□□ -0.47
CTDSP1-201ENST00000273062 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 TMEM14CQ9P0S9 112 aa12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 DUSP14O95147 198 aaKnown RBP12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 LAGE3Q14657 143 aa12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 POLEQ07864 2286 aa12.1□□□□□ -0.47
CTDSP1-201ENST00000273062 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
CTDSP1-201ENST00000273062 TIMM23O14925 209 aa12.09□□□□□ -0.47
CTDSP1-201ENST00000273062 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
CTDSP1-201ENST00000273062 ZNF56Q15929 161 aa12.08□□□□□ -0.47
CTDSP1-201ENST00000273062 LINC01559Q495D7 138 aa12.08□□□□□ -0.47
CTDSP1-201ENST00000273062 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.47
CTDSP1-201ENST00000273062 CCL17Q92583 94 aa12.08□□□□□ -0.47
CTDSP1-201ENST00000273062 UBTD1Q9HAC8 227 aa12.08□□□□□ -0.48
CTDSP1-201ENST00000273062 LRBAP50851 2863 aa12.08□□□□□ -0.48
CTDSP1-201ENST00000273062 A0A0J9YY99 117 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 NPFFO15130 113 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 CCL3L1P16619 93 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 MRGPRG-AS1Q2M3A8 158 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 IGHV3-30P01768 117 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 ORM1P02763 201 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 IGHV3-30-5P0DP03 117 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 TEX36Q5VZQ5 186 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 NRACQ8N912 160 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 A4D1N5 150 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 IGHV4-39P01824 125 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 EMP1P54849 157 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 IGFL4Q6B9Z1 124 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
CTDSP1-201ENST00000273062 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 CHD8Q9HCK8 2581 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 HERVK_113P63121 156 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 E7EQL1 145 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
CTDSP1-201ENST00000273062 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
CTDSP1-201ENST00000273062 LGALS9O00182 355 aa12.05□□□□□ -0.48
CTDSP1-201ENST00000273062 NDUFA7O95182 113 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms