RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KLHL30-AS1Q8NEE0 82 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 WFDC12Q8WWY7 111 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 DUX3Q96PT4 197 aa12.44□□□□□ -0.42
CCDC40-201ENST00000269318 IGHV4-4A0A075B6R2 117 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 M0R2Z0 102 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
CCDC40-201ENST00000269318 PKIAP61925 76 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 ORMDL3Q8N138 153 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 DPF1Q92782 380 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 A0A0J9YX75 114 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 KRTDAPP60985 99 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 SCGB2A2Q13296 93 aa12.43□□□□□ -0.42
CCDC40-201ENST00000269318 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
CCDC40-201ENST00000269318 C3orf79P0CE67 100 aa12.42□□□□□ -0.42
CCDC40-201ENST00000269318 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-201ENST00000269318 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
CCDC40-201ENST00000269318 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
CCDC40-201ENST00000269318 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
CCDC40-201ENST00000269318 CSN3P07498 182 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 RAB4AP20338 218 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 PRELID3AQ96N28 172 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 SMR3AQ99954 134 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 HECTD1Q9ULT8 2610 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 H3BVH4 76 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 PMCHL1Q16048 86 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 TEX43Q6ZNM6 134 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 PRO1933Q9H354 126 aa12.41□□□□□ -0.42
CCDC40-201ENST00000269318 CACNG7P62955 275 aa12.4□□□□□ -0.42
CCDC40-201ENST00000269318 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
CCDC40-201ENST00000269318 TSTD3H0UI37 97 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 CKS2P33552 79 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 HILS1P60008 231 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 EBLN2Q6P2I7 272 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 NF1P21359 2839 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 CD28P10747 220 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 RAX2Q96IS3 184 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
CCDC40-201ENST00000269318 NCR2O95944 276 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 NPYP01303 97 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 PPBPP02775 128 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 MED14OSP0DP75 135 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 EVI2AP22794 236 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 IFI27P40305 119 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-201ENST00000269318 ASIPP42127 132 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 FHL3Q13643 280 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-201ENST00000269318 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 SIGLEC8Q9NYZ4 499 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 LEPP41159 167 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 TDRG1Q3Y452 100 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 SPANXN1Q5VSR9 72 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 PRSS3P2Q8NHM4 247 aa12.38□□□□□ -0.43
CCDC40-201ENST00000269318 GNRH2O43555 120 aa12.37□□□□□ -0.43
CCDC40-201ENST00000269318 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
CCDC40-201ENST00000269318 TMEM61Q8N0U2 210 aa12.37□□□□□ -0.43
CCDC40-201ENST00000269318 C11orf44Q8N8P7 122 aa12.37□□□□□ -0.43
CCDC40-201ENST00000269318 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 LY6G6DO95868 133 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 LOC389332A0A1B0GUA5 103 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 C7orf71A4D174 169 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 S100A4P26447 101 aaKnown RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 DEFB114Q30KQ6 69 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 AMTNQ6UX39 209 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 CITED2Q99967 270 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 LAMTOR2Q9Y2Q5 125 aa12.36□□□□□ -0.43
CCDC40-201ENST00000269318 TIMM8BQ9Y5J9 83 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-201ENST00000269318 TCF21O43680 179 aa12.35□□□□□ -0.43
CCDC40-201ENST00000269318 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
CCDC40-201ENST00000269318 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
CCDC40-201ENST00000269318 DDTP30046 118 aa12.35□□□□□ -0.43
CCDC40-201ENST00000269318 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
CCDC40-201ENST00000269318 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 MTORP42345 2549 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 OTOGQ6ZRI0 2925 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 A8MTW9 85 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 CCL24O00175 119 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-201ENST00000269318 SPRY2O43597 315 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 CDKN1BP46527 198 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 DYNLRB2Q8TF09 96 aa12.34□□□□□ -0.43
CCDC40-201ENST00000269318 TSSC4Q9Y5U2 329 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-201ENST00000269318 A0A096LNJ9 63 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms