RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MRAPQ8TCY5 172 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 TYMSP04818 313 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 SEC11AP67812 179 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 UTF1Q5T230 341 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 PRSS57Q6UWY2 283 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 NUP210LQ5VU65 1888 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 IGHG2P01859 326 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
NPC1-201ENST00000269228 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
NPC1-201ENST00000269228 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 MORN5Q5VZ52 161 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 PATE2Q6UY27 113 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 TMEM86BQ8N661 226 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
NPC1-201ENST00000269228 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
NPC1-201ENST00000269228 CGB3P0DN86 165 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 CGB7P0DN87 165 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 NPC2P61916 151 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
NPC1-201ENST00000269228 RASL10AQ92737 203 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 hDV102S1A0JD36 115 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 TP53TG1Q9Y2A0 90 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 A8MWP6 167 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 SYS1-DBNDD2H3BUS1 97 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 GNRH2O43555 120 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 CRYGCP07315 174 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 NPSP0C0P6 89 aa10.67□□□□□ -0.7
NPC1-201ENST00000269228 A6NDX4 124 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 LTAP01374 205 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 GP9P14770 177 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 SS18Q15532 418 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 SPXQ9BT56 116 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 BUB3O43684 328 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 ZC2HC1BQ5TFG8 222 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 LY6G5BQ8NDX9 201 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 TNFRSF13BO14836 293 aaPredicted RBP10.66□□□□□ -0.7
NPC1-201ENST00000269228 CRIP3Q6Q6R5 217 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 SNHG12Q9BXW3 62 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 MRPL36Q9P0J6 103 aaKnown RBP10.66□□□□□ -0.7
NPC1-201ENST00000269228 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 PROP1O75360 226 aa10.66□□□□□ -0.7
NPC1-201ENST00000269228 SMIM27A0A1W2PRY6 76 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 SLAQ13239 276 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 I3L3M4 83 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 Q6ZPA2 131 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 MRPL53Q96EL3 112 aaKnown RBP10.65□□□□□ -0.7
NPC1-201ENST00000269228 SIGMAR1Q99720 223 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 A0A096LPF7 62 aa10.65□□□□□ -0.7
NPC1-201ENST00000269228 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
NPC1-201ENST00000269228 DNAJC9-AS1A6NH13 148 aa10.65□□□□□ -0.71
NPC1-201ENST00000269228 EGR2P11161 476 aaPredicted RBP10.65□□□□□ -0.71
NPC1-201ENST00000269228 CLPSL1A2RUU4 121 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 SPRY2O43597 315 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 LRP4O75096 1905 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 NACAE9PAV3 2078 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 K7EN84 100 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 C16orf54Q6UWD8 224 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 Q8N8P6 123 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 CITED2Q99967 270 aaPredicted RBP10.64□□□□□ -0.71
NPC1-201ENST00000269228 IGKV1OR2-108A0A075B7D4 117 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 C2orf70A6NJV1 201 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 CFHR4Q92496 578 aa10.64□□□□□ -0.71
NPC1-201ENST00000269228 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 PAX4O43316 350 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 Q0VG73 95 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 LINC00574Q9H8X3 128 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 S100A7L2Q5SY68 101 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 C11orf71Q6IPW1 123 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 IGF2BP2-AS1Q96M15 143 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 LINC01548A6NM66 108 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 M0R2P5 195 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 SLC25A20O43772 301 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 GAGE6Q13070 117 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 CDSNQ15517 529 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 ZMAT4Q9H898 229 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
NPC1-201ENST00000269228 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 U3KQE9 123 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 PRRC2AP48634 2157 aaKnown RBP10.62□□□□□ -0.71
NPC1-201ENST00000269228 ARHGAP21Q5T5U3 1957 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 INS-IGF2F8WCM5 200 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
NPC1-201ENST00000269228 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms