RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LINC00694P0DN24 101 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 LINC01587Q99440 93 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 F5H768 121 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 SBSPONQ8IVN8 264 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 TRGV9Q99603 122 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 RASL11BQ9BPW5 248 aa6.82□□□□□ -1.32
VAPB-201ENST00000265619 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 TRAV26-2A0A0B4J265 109 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 A8MWV9 139 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 SNCGO76070 127 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 CGB3P0DN86 165 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 CGB7P0DN87 165 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 ZNF80P51504 273 aaPredicted RBP6.81□□□□□ -1.32
VAPB-201ENST00000265619 UBE2D1P51668 147 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 MAP1LC3AQ9H492 121 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 CRYBG3Q68DQ2 2970 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 ARHGAP32A7KAX9 2087 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 SH2D1AO60880 128 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 THBDP07204 575 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 CD7P09564 240 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 IGFL3Q6UXB1 125 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 OTORQ9NRC9 128 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 KLK5Q9Y337 293 aaPredicted RBP6.81□□□□□ -1.32
VAPB-201ENST00000265619 ABCA12Q86UK0 2595 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 NOTCH2Q04721 2471 aa6.81□□□□□ -1.32
VAPB-201ENST00000265619 SHISA9B4DS77 424 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 EGR2P11161 476 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 LYZP61626 148 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 PRB3Q04118 309 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 MSMPQ1L6U9 139 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 MRPL20Q9BYC9 149 aaKnown RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 TEX49A0A1B0GTD5 131 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 MALRD1Q5VYJ5 2156 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 USP9XQ93008 2570 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 A0A1W2PPI3 338 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 MBD3L4A6NDZ8 208 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 MBD3L3A6NE82 208 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 MBD3L5A6NJ08 208 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 FCN3O75636 299 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 ERHP84090 104 aaKnown RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 TMEM78Q5T7P6 136 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 C15orf53Q8NAA6 179 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 MBD3L2Q8NHZ7 208 aaPredicted RBP6.8□□□□□ -1.32
VAPB-201ENST00000265619 Q8TAT8 98 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 KLK15Q9H2R5 256 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 C21orf62Q9NYP8 219 aa6.8□□□□□ -1.32
VAPB-201ENST00000265619 CCDC168Q8NDH2 2452 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 SMIM9A6NGZ8 99 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 C9JAW5 83 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 UCNP55089 124 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 SIGLEC15Q6ZMC9 328 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 Q6ZS46 218 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 DYNLRB1Q9NP97 96 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 USP9YO00507 2555 aaPredicted RBP6.79□□□□□ -1.32
VAPB-201ENST00000265619 DCHS2Q6V1P9 2916 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 TLN2Q9Y4G6 2542 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 BSPH1Q075Z2 132 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 IGFL4Q6B9Z1 124 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 OR11H6Q8NGC7 330 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
VAPB-201ENST00000265619 CCL17Q92583 94 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 SIRPDQ9H106 197 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 SLC25A15Q9Y619 301 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 NCBP2LA6PVI3 153 aaKnown RBP6.79□□□□□ -1.32
VAPB-201ENST00000265619 GLRXP35754 106 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 NDUFA11Q86Y39 141 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 Q8N1Y9 231 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 SLC25A39Q9BZJ4 359 aaPredicted RBP6.79□□□□□ -1.32
VAPB-201ENST00000265619 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 USP24Q9UPU5 2620 aa6.79□□□□□ -1.32
VAPB-201ENST00000265619 IGKV2-40A0A087WW87 121 aaPredicted RBP6.78□□□□□ -1.32
VAPB-201ENST00000265619 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 OOSP1A8MZH6 123 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 SLC25A20O43772 301 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 IGKV2D-40P01614 121 aaPredicted RBP6.78□□□□□ -1.32
VAPB-201ENST00000265619 TRGV3P03979 118 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 AAMDCQ9H7C9 122 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 LYNX1G3V0Z9 82 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 LY6HO94772 140 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 CFC1P0CG37 223 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 LYNX1P0DP58 116 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 RPL7P18124 248 aaKnown RBP6.78□□□□□ -1.32
VAPB-201ENST00000265619 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
VAPB-201ENST00000265619 TMEM155Q4W5P6 130 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 VKORC1Q9BQB6 163 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 MDFICQ9P1T7 246 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 IGKV3-15P01624 115 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
VAPB-201ENST00000265619 CSPG4Q6UVK1 2322 aa6.77□□□□□ -1.32
VAPB-201ENST00000265619 SLC25A16P16260 332 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 CD40P25942 277 aa6.77□□□□□ -1.33
VAPB-201ENST00000265619 TNFAIP6P98066 277 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms