RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 UFC1Q9Y3C8 167 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 KIF25-AS1Q9Y6Z4 181 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 A8MTW9 85 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 PF4V1P10720 104 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 EVI2AP22794 236 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 GOLT1BQ9Y3E0 138 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 PRRC2AP48634 2157 aaKnown RBP8.37□□□□□ -1.07
MSH3-201ENST00000265081 ZNF469Q96JG9 3925 aaPredicted RBP8.37□□□□□ -1.07
MSH3-201ENST00000265081 ODF1Q14990 250 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 BVES-AS1Q5T3Y7 98 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
MSH3-201ENST00000265081 LINC00315P59091 139 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 IGHV3-11P01762 117 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 EDN2P20800 178 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 CD5LO43866 347 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 ELANEP08246 267 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 COL6A6A6NMZ7 2263 aa8.36□□□□□ -1.07
MSH3-201ENST00000265081 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
MSH3-201ENST00000265081 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 SPTA1P02549 2419 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
MSH3-201ENST00000265081 LGALS1P09382 135 aaKnown RBP8.35□□□□□ -1.07
MSH3-201ENST00000265081 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
MSH3-201ENST00000265081 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 LCNL1Q6ZST4 164 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 MCRIP2Q9BUT9 160 aaKnown RBP8.35□□□□□ -1.07
MSH3-201ENST00000265081 NCOR2Q9Y618 2525 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 RASL10AQ92737 203 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 FLNCQ14315 2725 aa8.35□□□□□ -1.07
MSH3-201ENST00000265081 COX6B1P14854 86 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 IGHV4OR15-8A0A075B7B6 117 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 A0A087WW49 117 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 K7EQG2 157 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 LEPP41159 167 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 TMEM95Q3KNT9 176 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 ANXA2RQ3ZCQ2 193 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 UBE2E2Q96LR5 201 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 H3BVH4 76 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 ASIPP42127 132 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 TFPI2P48307 235 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 CACNA1BQ00975 2339 aa8.34□□□□□ -1.07
MSH3-201ENST00000265081 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.08
MSH3-201ENST00000265081 LAGE3Q14657 143 aa8.34□□□□□ -1.08
MSH3-201ENST00000265081 C9orf85Q96MD7 179 aa8.34□□□□□ -1.08
MSH3-201ENST00000265081 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.08
MSH3-201ENST00000265081 UTP20O75691 2785 aaKnown RBP8.33□□□□□ -1.08
MSH3-201ENST00000265081 NBPF19A0A087WUL8 3843 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 HINT1P49773 126 aaPredicted RBP8.33□□□□□ -1.08
MSH3-201ENST00000265081 ID1P41134 155 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 C12orf54Q6X4T0 127 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 ADAMTSL5Q6ZMM2 481 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 SMIM2Q9BVW6 85 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 TRAV2A0A0B4J234 112 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 ATP5LO75964 103 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 NPSP0C0P6 89 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 MPV17L2Q567V2 206 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 C10orf99Q6UWK7 81 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 SMIM15Q7Z3B0 74 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 OR9G4Q8NGQ1 327 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
MSH3-201ENST00000265081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.085e-6■■■■□ 22.8
MSH3-201ENST00000265081 A0A0J9YX75 114 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 TMEM158Q8WZ71 300 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 F6UB75 175 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 WNK2Q9Y3S1 2297 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 PRB1P04280 392 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 DEFB1P60022 68 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 SPANXN1Q5VSR9 72 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 EDA2RQ9HAV5 297 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
MSH3-201ENST00000265081 FXYD7P58549 80 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 USP9XQ93008 2570 aaPredicted RBP8.31□□□□□ -1.08
MSH3-201ENST00000265081 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 ZNF124Q15973 351 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 USP24Q9UPU5 2620 aa8.31□□□□□ -1.08
MSH3-201ENST00000265081 CBY3A6NI87 242 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
MSH3-201ENST00000265081 BATFQ16520 125 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 TMEM86BQ8N661 226 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 MUC4Q99102 2169 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 PPP1R17O96001 155 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 G0S2P27469 103 aa8.3□□□□□ -1.08
MSH3-201ENST00000265081 A0A087WX48 190 aa8.29□□□□□ -1.08
MSH3-201ENST00000265081 C7orf71A4D174 169 aa8.29□□□□□ -1.08
MSH3-201ENST00000265081 GNRH2O43555 120 aa8.29□□□□□ -1.08
MSH3-201ENST00000265081 TGFAP01135 160 aa8.29□□□□□ -1.08
MSH3-201ENST00000265081 SUMO2P61956 95 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms