RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MBD3L3A6NE82 208 aaPredicted RBP11.84□□□□□ -0.51
CASC3-201ENST00000264645 MBD3L5A6NJ08 208 aaPredicted RBP11.84□□□□□ -0.51
CASC3-201ENST00000264645 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
CASC3-201ENST00000264645 CFC1P0CG37 223 aa11.84□□□□□ -0.51
CASC3-201ENST00000264645 ZNF672Q499Z4 452 aaPredicted RBP11.84□□□□□ -0.51
CASC3-201ENST00000264645 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
CASC3-201ENST00000264645 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
CASC3-201ENST00000264645 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
CASC3-201ENST00000264645 SDHAF1A6NFY7 115 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 TCTEX1D4Q5JR98 221 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 IGFBPL1Q8WX77 278 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 AGPAT4-IT1Q9H0P7 198 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 FOXE3Q13461 319 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
CASC3-201ENST00000264645 FCN3O75636 299 aa11.82□□□□□ -0.52
CASC3-201ENST00000264645 GAGE2AQ6NT46 116 aa11.82□□□□□ -0.52
CASC3-201ENST00000264645 DYNLRB2Q8TF09 96 aa11.82□□□□□ -0.52
CASC3-201ENST00000264645 C1orf159Q96HA4 380 aa11.82□□□□□ -0.52
CASC3-201ENST00000264645 INSL3P51460 131 aa11.82□□□□□ -0.52
CASC3-201ENST00000264645 DUX3Q96PT4 197 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
CASC3-201ENST00000264645 CARD19Q96LW7 228 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 ATG2AQ2TAZ0 1938 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 PTPRQQ9UMZ3 2332 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 LHBP01229 141 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
CASC3-201ENST00000264645 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
CASC3-201ENST00000264645 A4D1N5 150 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 ZFP2Q6ZN57 461 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 K7EIM0 57 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 HERV-K104P63124 156 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 I3L2K1 104 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 NUP37Q8NFH4 326 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 TM2D2Q9BX73 214 aa11.8□□□□□ -0.52
CASC3-201ENST00000264645 PIEZO2Q9H5I5 2752 aa11.79□□□□□ -0.52
CASC3-201ENST00000264645 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
CASC3-201ENST00000264645 ZFHX2Q9C0A1 2572 aaPredicted RBP11.79□□□□□ -0.52
CASC3-201ENST00000264645 G3V318 75 aa11.79□□□□□ -0.52
CASC3-201ENST00000264645 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
CASC3-201ENST00000264645 LY6G5BQ8NDX9 201 aa11.79□□□□□ -0.52
CASC3-201ENST00000264645 RS1O15537 224 aa11.78□□□□□ -0.52
CASC3-201ENST00000264645 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
CASC3-201ENST00000264645 CD59P13987 128 aa11.78□□□□□ -0.52
CASC3-201ENST00000264645 MSMPQ1L6U9 139 aa11.78□□□□□ -0.52
CASC3-201ENST00000264645 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
CASC3-201ENST00000264645 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
CASC3-201ENST00000264645 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
CASC3-201ENST00000264645 TMEM141Q96I45 108 aa11.77□□□□□ -0.52
CASC3-201ENST00000264645 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.52
CASC3-201ENST00000264645 TRAV41A0A0B4J266 112 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 CR1LQ2VPA4 569 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 PRAC2D3DTV9 90 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
CASC3-201ENST00000264645 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
CASC3-201ENST00000264645 NCKAP5O14513 1909 aa11.76□□□□□ -0.53
CASC3-201ENST00000264645 TRPT1Q86TN4 253 aaKnown RBP11.76□□□□□ -0.53
CASC3-201ENST00000264645 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
CASC3-201ENST00000264645 E7EQL1 145 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 CGB3P0DN86 165 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 CGB7P0DN87 165 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
CASC3-201ENST00000264645 A0A0G2JNJ9 132 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 CRYGCP07315 174 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 Q9UFV3 132 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 TCL1BO95988 128 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 IGLV2-23P01705 113 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 GATD1Q8NB37 220 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 LINC01587Q99440 93 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 GNRH2O43555 120 aa11.75□□□□□ -0.53
CASC3-201ENST00000264645 AGRNO00468 2067 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 CRIP1P50238 77 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 RNASE13Q5GAN3 156 aaKnown RBP11.74□□□□□ -0.53
CASC3-201ENST00000264645 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
CASC3-201ENST00000264645 RHPN1-AS1Q9BWJ2 59 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 TRBV7-1A0A0A6YYK4 115 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
CASC3-201ENST00000264645 MYCNOSP40205 109 aa11.73□□□□□ -0.53
CASC3-201ENST00000264645 F6UB75 175 aa11.73□□□□□ -0.53
CASC3-201ENST00000264645 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
CASC3-201ENST00000264645 WISP2O76076 250 aa11.73□□□□□ -0.53
CASC3-201ENST00000264645 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 LINC00158P58513 81 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
CASC3-201ENST00000264645 NDUFA11Q86Y39 141 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 ITLN2Q8WWU7 325 aaPredicted RBP11.72□□□□□ -0.53
CASC3-201ENST00000264645 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
CASC3-201ENST00000264645 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms