RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CFPP27918 469 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 BVES-AS1Q5T3Y7 98 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 SEC16AO15027 2179 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 COL4A6Q14031 1691 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 BAALC-AS2P0C853 105 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 AKAP6Q13023 2319 aa11.66□□□□□ -0.54
CCDC6-201ENST00000263102 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
CCDC6-201ENST00000263102 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.54
CCDC6-201ENST00000263102 IGLV2-18A0A075B6J9 118 aa11.65□□□□□ -0.54
CCDC6-201ENST00000263102 NREPQ16612 68 aa11.65□□□□□ -0.54
CCDC6-201ENST00000263102 C10orf105Q8TEF2 133 aa11.65□□□□□ -0.54
CCDC6-201ENST00000263102 UBE2D4Q9Y2X8 147 aa11.65□□□□□ -0.54
CCDC6-201ENST00000263102 HIGD2AQ9BW72 106 aa11.65□□□□□ -0.54
CCDC6-201ENST00000263102 FANCMQ8IYD8 2048 aa11.65□□□□□ -0.55
CCDC6-201ENST00000263102 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 LY6G6EA0A0G2JKS1 128 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 CYTL1Q9NRR1 136 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 U3KQA8 63 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 MYO7BQ6PIF6 2116 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 K7ERJ3 54 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 SCN5AQ14524 2016 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 HILS1P60008 231 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 PIP4P1Q86T03 277 aa11.64□□□□□ -0.55
CCDC6-201ENST00000263102 TRBV24-1A0A075B6N3 115 aa11.63□□□□□ -0.55
CCDC6-201ENST00000263102 SRSF2Q01130 221 aaKnown RBP11.63□□□□□ -0.55
CCDC6-201ENST00000263102 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
CCDC6-201ENST00000263102 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
CCDC6-201ENST00000263102 CTSZQ9UBR2 303 aa11.63□□□□□ -0.55
CCDC6-201ENST00000263102 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 ADORA2A-AS1P86434 159 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 C4orf3Q8WVX3 66 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
CCDC6-201ENST00000263102 SPAG11BQ08648 103 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 LINC00311Q8N616 119 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 ACYP1P07311 99 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 WT1P19544 449 aaPredicted RBP11.62□□□□□ -0.55
CCDC6-201ENST00000263102 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 IGKV1-17P01599 117 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
CCDC6-201ENST00000263102 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
CCDC6-201ENST00000263102 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
CCDC6-201ENST00000263102 PLA2G5P39877 138 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 FER1L5A0AVI2 2057 aa11.62□□□□□ -0.55
CCDC6-201ENST00000263102 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 TMEM14CQ9P0S9 112 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 SND1-IT1Q9HBX3 110 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 HERV-K104P63124 156 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 RPL39LQ96EH5 51 aaKnown RBP11.61□□□□□ -0.55
CCDC6-201ENST00000263102 TRBV20-1A0A075B6N2 111 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 DOPEY2Q9Y3R5 2298 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 DAND5Q8N907 189 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 SLX1AQ9BQ83 275 aa11.61□□□□□ -0.55
CCDC6-201ENST00000263102 PI4KAP42356 2102 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 AGPAT4-IT1Q9H0P7 198 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 IGLL1P15814 213 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 C2orf70A6NJV1 201 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 TEX22C9J3V5 150 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 NPSP0C0P6 89 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 CEND1Q8N111 149 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
CCDC6-201ENST00000263102 CRYGDP07320 174 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 SVIPQ8NHG7 77 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 FAM19A1Q7Z5A9 133 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 ALPK2Q86TB3 2170 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
CCDC6-201ENST00000263102 C20orf78Q9BR46 151 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 IGLV1-44P01699 117 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 PTPRFP10586 1907 aa11.59□□□□□ -0.55
CCDC6-201ENST00000263102 DKK2Q9UBU2 259 aa11.58□□□□□ -0.56
CCDC6-201ENST00000263102 QRFPP83859 136 aa11.58□□□□□ -0.56
CCDC6-201ENST00000263102 CEP290O15078 2479 aa11.58□□□□□ -0.56
CCDC6-201ENST00000263102 PROK2Q9HC23 129 aa11.58□□□□□ -0.56
CCDC6-201ENST00000263102 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
CCDC6-201ENST00000263102 IFITM1P13164 125 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 F8VRH5 84 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 CACNA1IQ9P0X4 2223 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 C15orf65H3BRN8 121 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 DOCK3Q8IZD9 2030 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 HRCT1Q6UXD1 115 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 SPANXA1Q9NS26 97 aa11.57□□□□□ -0.56
CCDC6-201ENST00000263102 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
CCDC6-201ENST00000263102 DEFB131BA0A096LNP1 70 aa11.56□□□□□ -0.56
CCDC6-201ENST00000263102 IGKV3D-7A0A0C4DH55 119 aa11.56□□□□□ -0.56
CCDC6-201ENST00000263102 NRXN2Q9P2S2 1712 aa11.56□□□□□ -0.56
CCDC6-201ENST00000263102 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
CCDC6-201ENST00000263102 RITA1Q96K30 269 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms