RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PKDREJQ9NTG1 2253 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 UBE2E1P51965 193 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 DYSFO75923 2080 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
SMG6-201ENST00000263073 UTF1Q5T230 341 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 Q9H8V8 135 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 LINC01619G3V211 115 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 DTX1Q86Y01 620 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 ARHGAP21Q5T5U3 1957 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 ZNF407Q9C0G0 2248 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 A0A0J9YY99 117 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
SMG6-201ENST00000263073 Q6ZQT7 251 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 IGF2BP2-AS1Q96M15 143 aa9.49□□□□□ -0.89
SMG6-201ENST00000263073 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 AGPAT4-IT1Q9H0P7 198 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 IGHV4-28A0A0C4DH34 117 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 SIVA1O15304 175 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 ZNF493Q6ZR52 646 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 NCOR1O75376 2440 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 DAD1P61803 113 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
SMG6-201ENST00000263073 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 DEFB136Q30KP8 78 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 Q6ZS92 163 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 LINC01356Q8N9X3 169 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 TAL2Q16559 108 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 MUSTN1Q8IVN3 82 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 IGLV2-23P01705 113 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
SMG6-201ENST00000263073 LY6G6EA0A0G2JKS1 128 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 K7EM74 188 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
SMG6-201ENST00000263073 U3KQA8 63 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 MSMBP08118 114 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 C5orf47Q569G3 176 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 Q8TCH9 128 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 WDR81Q562E7 1941 aa9.47□□□□□ -0.89
SMG6-201ENST00000263073 TAX1BP3O14907 124 aa9.46□□□□□ -0.89
SMG6-201ENST00000263073 GTSF1Q8WW33 167 aa9.46□□□□□ -0.89
SMG6-201ENST00000263073 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.89
SMG6-201ENST00000263073 IGLV3-1P01715 115 aa9.46□□□□□ -0.89
SMG6-201ENST00000263073 DEFB1P60022 68 aa9.46□□□□□ -0.89
SMG6-201ENST00000263073 COL6A6A6NMZ7 2263 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 GATA4P43694 442 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
SMG6-201ENST00000263073 USF3Q68DE3 2245 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 C5orf38Q86SI9 138 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 APRG1Q8IVJ8 170 aa9.46□□□□□ -0.9
SMG6-201ENST00000263073 RHODO00212 210 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 NDUFA4O00483 81 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 CR1LQ2VPA4 569 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 PYGO2Q9BRQ0 406 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 PTH2Q96A98 100 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 TICRRQ7Z2Z1 1910 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 C11orf53Q8IXP5 236 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 CTSZQ9UBR2 303 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
SMG6-201ENST00000263073 ETV2O00321 342 aaPredicted RBP9.45□□□□□ -0.9
SMG6-201ENST00000263073 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
SMG6-201ENST00000263073 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
SMG6-201ENST00000263073 DSCR9P59020 149 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 A4D1N5 150 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 PATE2Q6UY27 113 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 HERVK_113P63121 156 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 C20orf78Q9BR46 151 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 U3KQE9 123 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
SMG6-201ENST00000263073 NDUFS5O43920 106 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
SMG6-201ENST00000263073 EP300Q09472 2414 aaPredicted RBP9.43□□□□□ -0.9
SMG6-201ENST00000263073 PLXNA4Q9HCM2 1894 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 WNK2Q9Y3S1 2297 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 GRNP28799 593 aaKnown RBP9.43□□□□□ -0.9
SMG6-201ENST00000263073 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 C22orf46C9J442 243 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 CNOT1A5YKK6 2376 aaKnown RBP9.43□□□□□ -0.9
SMG6-201ENST00000263073 TSC2P49815 1807 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 NBL1P41271 181 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 NCOR1P1Q9H4R4 102 aa9.43□□□□□ -0.9
SMG6-201ENST00000263073 PRAC2D3DTV9 90 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 ESM1Q9NQ30 184 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 SRCAPQ6ZRS2 3230 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 GP9P14770 177 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 Q96MF0 132 aa9.42□□□□□ -0.9
SMG6-201ENST00000263073 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms