RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
CCDC94-201ENST00000262962 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
CCDC94-201ENST00000262962 HUWE1Q7Z6Z7 4374 aaKnown RBP12.21□□□□□ -0.45
CCDC94-201ENST00000262962 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 C19orf71A6NCJ1 209 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 ORM1P02763 201 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 PRM2P04554 102 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 LINC01559Q495D7 138 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
CCDC94-201ENST00000262962 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
CCDC94-201ENST00000262962 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 B4DEV8 164 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 AZU1P20160 251 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
CCDC94-201ENST00000262962 NDUFA5Q16718 116 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 KRBOX1C9JBD0 128 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 F8W036 122 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 P01737 135 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 IBA57Q5T440 356 aaKnown RBP12.2□□□□□ -0.46
CCDC94-201ENST00000262962 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 SEC11CQ9BY50 192 aa12.2□□□□□ -0.46
CCDC94-201ENST00000262962 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
CCDC94-201ENST00000262962 M0R036 132 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 TYMSP04818 313 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 ADCYAP1P18509 176 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 ADIRFQ15847 76 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 NUDT10Q8NFP7 164 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 NUDT11Q96G61 164 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 U3KQK5 164 aa12.19□□□□□ -0.46
CCDC94-201ENST00000262962 GNRH2O43555 120 aa12.18□□□□□ -0.46
CCDC94-201ENST00000262962 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
CCDC94-201ENST00000262962 C11orf72Q8NBR9 251 aa12.18□□□□□ -0.46
CCDC94-201ENST00000262962 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
CCDC94-201ENST00000262962 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
CCDC94-201ENST00000262962 IGHV3-16A0A0C4DH30 117 aa12.17□□□□□ -0.46
CCDC94-201ENST00000262962 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
CCDC94-201ENST00000262962 ERVFC1-1P60608 527 aa12.17□□□□□ -0.46
CCDC94-201ENST00000262962 RPL19P84098 196 aaKnown RBP12.17□□□□□ -0.46
CCDC94-201ENST00000262962 PNRC1Q12796 327 aaPredicted RBP12.17□□□□□ -0.46
CCDC94-201ENST00000262962 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
CCDC94-201ENST00000262962 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
CCDC94-201ENST00000262962 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 DEFB4AO15263 64 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 CXCL1P09341 107 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 TCL1AP56279 114 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 RPS20P60866 119 aaKnown RBP12.16□□□□□ -0.46
CCDC94-201ENST00000262962 SLC7A5P1Q8MH63 180 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 OR2D3Q8NGH3 330 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 RPP21Q9H633 154 aaKnown RBP12.16□□□□□ -0.46
CCDC94-201ENST00000262962 GSN-AS1Q9NRJ2 163 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
CCDC94-201ENST00000262962 TIMM8BQ9Y5J9 83 aaPredicted RBP12.16□□□□□ -0.46
CCDC94-201ENST00000262962 TMSB15BA0A087X1C1 80 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 XKRY2A2RUG3 117 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
CCDC94-201ENST00000262962 ASIPP42127 132 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 EMP1P54849 157 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 ZNF575Q86XF7 245 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
CCDC94-201ENST00000262962 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
CCDC94-201ENST00000262962 DAZ2Q13117 558 aaKnown RBP12.14□□□□□ -0.47
CCDC94-201ENST00000262962 C15orf54Q8N8G6 183 aa12.14□□□□□ -0.47
CCDC94-201ENST00000262962 SPXQ9BT56 116 aa12.14□□□□□ -0.47
CCDC94-201ENST00000262962 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
CCDC94-201ENST00000262962 GRIFINA4D1Z8 144 aa12.13□□□□□ -0.47
CCDC94-201ENST00000262962 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
CCDC94-201ENST00000262962 IL36BQ9NZH7 164 aa12.13□□□□□ -0.47
CCDC94-201ENST00000262962 CARHSP1Q9Y2V2 147 aaKnown RBP12.13□□□□□ -0.47
CCDC94-201ENST00000262962 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
CCDC94-201ENST00000262962 CT83Q5H943 113 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 OR10G8Q8NGN5 311 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 DKK2Q9UBU2 259 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 MUC4Q99102 2169 aa12.12□□□□□ -0.47
CCDC94-201ENST00000262962 H3BVH4 76 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 SPART-AS1P0CW21 52 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 MED14OSP0DP75 135 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 FAM222AQ5U5X8 452 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 A8MWL6 223 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 V9GYV3 84 aa12.11□□□□□ -0.47
CCDC94-201ENST00000262962 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 M0R2P5 195 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 SPINK4O60575 86 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 GZMBP10144 247 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 SCRT2Q9NQ03 307 aa12.1□□□□□ -0.47
CCDC94-201ENST00000262962 A0A1W2PPQ1 181 aa12.09□□□□□ -0.47
CCDC94-201ENST00000262962 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
CCDC94-201ENST00000262962 SNAI2O43623 268 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms