RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 NPIPB6E9PJ23 425 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 IGLV1-40P01703 118 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
VMP1-201ENST00000262291 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.36□□□□□ -0.75
VMP1-201ENST00000262291 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 A0A1B0GXF2 115 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 K7EP34 96 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 CSN3P07498 182 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 HBBP68871 147 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 KLF5Q13887 457 aaPredicted RBP10.36□□□□□ -0.75
VMP1-201ENST00000262291 NEGR1Q7Z3B1 354 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
VMP1-201ENST00000262291 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
VMP1-201ENST00000262291 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 U3KQE9 123 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 CUBNO60494 3623 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 CFHR3Q02985 330 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 USMG5Q96IX5 58 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 NF1P21359 2839 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 SPCS1Q9Y6A9 102 aa10.35□□□□□ -0.75
VMP1-201ENST00000262291 KIR3DS1Q14943 382 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 Q6YL49 198 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 WIPF2Q8TF74 440 aaPredicted RBP10.34□□□□□ -0.75
VMP1-201ENST00000262291 GLMPQ8WWB7 406 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 SETD2Q9BYW2 2564 aaPredicted RBP10.34□□□□□ -0.75
VMP1-201ENST00000262291 HECTD1Q9ULT8 2610 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 J3QKU1 62 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 NDUFA4O00483 81 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 CT83Q5H943 113 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
VMP1-201ENST00000262291 PDZD2O15018 2839 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 A0A1B0GV72 72 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 FSHBP01225 129 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 ORM1P02763 201 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 WFDC3Q8IUB2 231 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 TMEM213A2RRL7 107 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 F6UB75 175 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 NCR2O95944 276 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
VMP1-201ENST00000262291 SORL1Q92673 2214 aa10.33□□□□□ -0.76
VMP1-201ENST00000262291 MTORP42345 2549 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 COX8AP10176 69 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 PSMB8P28062 276 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 TSSC4Q9Y5U2 329 aaPredicted RBP10.32□□□□□ -0.76
VMP1-201ENST00000262291 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
VMP1-201ENST00000262291 H3BUA1 57 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 SEC11AP67812 179 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 LRRC75A-AS1Q8N1F1 130 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 SIGMAR1Q99720 223 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 ZNF702PQ9H963 129 aa10.32□□□□□ -0.76
VMP1-201ENST00000262291 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 PSMG3-AS1Q96PY0 264 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 A0A1B0GUT8 65 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
VMP1-201ENST00000262291 H3BRM9 83 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 HSD52Q0P140 79 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 A6NDN8 102 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 UNC79Q9P2D8 2635 aa10.3□□□□□ -0.76
VMP1-201ENST00000262291 SPRY2O43597 315 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 SMPXQ9UHP9 88 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 IGHV7-4-1A0A0J9YVY3 117 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 CRYBA4P53673 196 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 PRR9Q5T870 116 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 MS4A6AQ9H2W1 248 aa10.29□□□□□ -0.76
VMP1-201ENST00000262291 HAX1O00165 279 aa10.28□□□□□ -0.76
VMP1-201ENST00000262291 SYNJ2BPP57105 145 aa10.28□□□□□ -0.76
VMP1-201ENST00000262291 CKS1BP61024 79 aa10.28□□□□□ -0.76
VMP1-201ENST00000262291 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
VMP1-201ENST00000262291 DAZ1Q9NQZ3 744 aaKnown RBP10.28□□□□□ -0.76
VMP1-201ENST00000262291 IGHV4OR15-8A0A075B7B6 117 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms