RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
SYT1-201ENST00000261205 SS18Q15532 418 aa12.27□□□□□ -0.45
SYT1-201ENST00000261205 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
SYT1-201ENST00000261205 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 Q8N8P6 123 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 C9orf47Q6ZRZ4 202 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 TMEM141Q96I45 108 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 C20orf78Q9BR46 151 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 HIST3H2BBQ8N257 126 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 HIST1H2BLQ99880 126 aa12.26□□□□□ -0.45
SYT1-201ENST00000261205 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 SRCAPQ6ZRS2 3230 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 CIDEAO60543 219 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 RNASE1P07998 156 aaKnown RBP12.25□□□□□ -0.45
SYT1-201ENST00000261205 C16orf74Q96GX8 76 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 Q8N6K4 173 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 K7EMI3 77 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 RHOHQ15669 191 aa12.25□□□□□ -0.45
SYT1-201ENST00000261205 LOC107984156A0A0G2JMH3 177 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 ARL17AQ8IVW1 177 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 RBMY1BA6NDE4 496 aaKnown RBP12.24□□□□□ -0.45
SYT1-201ENST00000261205 RBMY1EA6NEQ0 496 aaKnown RBP12.24□□□□□ -0.45
SYT1-201ENST00000261205 RBMY1DP0C7P1 496 aaKnown RBP12.24□□□□□ -0.45
SYT1-201ENST00000261205 SMIM13P0DJ93 91 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
SYT1-201ENST00000261205 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 IGF2BP2-AS1Q96M15 143 aa12.24□□□□□ -0.45
SYT1-201ENST00000261205 KLF12Q9Y4X4 402 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 F6UB75 175 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 INAFM1C9JVW0 142 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 LY6G6DO95868 133 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 CKS1BP61024 79 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 GAGE1Q13065 139 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 GAGE4Q13068 117 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 GAGE5Q13069 117 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 CD300EQ496F6 205 aaPredicted RBP12.23□□□□□ -0.45
SYT1-201ENST00000261205 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
SYT1-201ENST00000261205 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
SYT1-201ENST00000261205 CBY1Q9Y3M2 126 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 TMEM243Q9BU79 118 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 VWC2LB2RUY7 222 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
SYT1-201ENST00000261205 Q6ZSV7 163 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
SYT1-201ENST00000261205 TRAV2A0A0B4J234 112 aa12.21□□□□□ -0.45
SYT1-201ENST00000261205 H7C2G1 150 aa12.21□□□□□ -0.45
SYT1-201ENST00000261205 PHLDA1Q8WV24 401 aaPredicted RBP12.21□□□□□ -0.45
SYT1-201ENST00000261205 RMI2Q96E14 147 aa12.21□□□□□ -0.45
SYT1-201ENST00000261205 DNAL4O96015 105 aa12.21□□□□□ -0.45
SYT1-201ENST00000261205 HILS1P60008 231 aa12.21□□□□□ -0.45
SYT1-201ENST00000261205 IGKV1D-37A0A075B6S9 117 aa12.21□□□□□ -0.46
SYT1-201ENST00000261205 EGR2P11161 476 aaPredicted RBP12.21□□□□□ -0.46
SYT1-201ENST00000261205 UTF1Q5T230 341 aa12.21□□□□□ -0.46
SYT1-201ENST00000261205 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.46
SYT1-201ENST00000261205 KMT2EQ8IZD2 1858 aa12.21□□□□□ -0.46
SYT1-201ENST00000261205 SMKR1H3BMG3 65 aa12.21□□□□□ -0.46
SYT1-201ENST00000261205 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.46
SYT1-201ENST00000261205 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 PAX4O43316 350 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 ZNRF2Q8NHG8 242 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 C18orf32Q8TCD1 76 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 TMEM238C9JI98 176 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 PIFOQ8TCI5 191 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 VPS25Q9BRG1 176 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 MORN5Q5VZ52 161 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
SYT1-201ENST00000261205 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 APRG1Q8IVJ8 170 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
SYT1-201ENST00000261205 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 GOLGB1Q14789 3259 aaKnown RBP12.19□□□□□ -0.46
SYT1-201ENST00000261205 PSCAO43653 123 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 U3KQE9 123 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
SYT1-201ENST00000261205 ODF3Q96PU9 254 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 SMAD5-AS1Q9Y6J3 95 aa12.19□□□□□ -0.46
SYT1-201ENST00000261205 SYS1-DBNDD2H3BUS1 97 aa12.18□□□□□ -0.46
SYT1-201ENST00000261205 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
SYT1-201ENST00000261205 UNQ9165/PRO28630Q6UXU0 137 aa12.18□□□□□ -0.46
SYT1-201ENST00000261205 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
SYT1-201ENST00000261205 LINC01548A6NM66 108 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms