RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 OR4C5Q8NGB2 326 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 LY96Q9Y6Y9 160 aa11.45□□□□□ -0.58
CGREF1-201ENST00000260595 LOC100131303A0A0U1RQF7 123 aa11.44□□□□□ -0.58
CGREF1-201ENST00000260595 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
CGREF1-201ENST00000260595 CDC34P49427 236 aaPredicted RBP11.44□□□□□ -0.58
CGREF1-201ENST00000260595 HSD17B11Q8NBQ5 300 aa11.44□□□□□ -0.58
CGREF1-201ENST00000260595 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
CGREF1-201ENST00000260595 SGK494Q96LW2 274 aa11.44□□□□□ -0.58
CGREF1-201ENST00000260595 SCRT2Q9NQ03 307 aa11.44□□□□□ -0.58
CGREF1-201ENST00000260595 PGPEP1Q9NXJ5 209 aa11.44□□□□□ -0.58
CGREF1-201ENST00000260595 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 C9JCJ5 164 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 K7EP13 123 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 ZNF80P51504 273 aaPredicted RBP11.43□□□□□ -0.58
CGREF1-201ENST00000260595 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 KCNS1Q96KK3 526 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 AQP10Q96PS8 301 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
CGREF1-201ENST00000260595 SDF2L1Q9HCN8 221 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
CGREF1-201ENST00000260595 SERTM2A0A1B0GWG4 89 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 TCRAP04437 139 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
CGREF1-201ENST00000260595 ATP6V0CP27449 155 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 GCHFRP30047 84 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 Q5BKY6 102 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
CGREF1-201ENST00000260595 A0A087WTM6 91 aa11.41□□□□□ -0.58
CGREF1-201ENST00000260595 ASB13Q8WXK3 278 aa11.41□□□□□ -0.58
CGREF1-201ENST00000260595 EREGO14944 169 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 EVI2AP22794 236 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 TIRAPP58753 221 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 SERF2P84101 59 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 CDPF1Q6NVV7 123 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 PSG8Q9UQ74 426 aa11.4□□□□□ -0.58
CGREF1-201ENST00000260595 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
CGREF1-201ENST00000260595 SUMO1P63165 101 aaKnown RBP11.39□□□□□ -0.59
CGREF1-201ENST00000260595 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
CGREF1-201ENST00000260595 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
CGREF1-201ENST00000260595 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
CGREF1-201ENST00000260595 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
CGREF1-201ENST00000260595 TAAR5O14804 337 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 RS1O15537 224 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 PTTG1O95997 202 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 GCGP01275 180 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 MBP02144 154 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
CGREF1-201ENST00000260595 ZNF876PQ49A33 203 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 CFAP126Q5VTH2 177 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 SLC25A29Q8N8R3 303 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 TMEM75Q8N9X5 138 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 MED28Q9H204 178 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
CGREF1-201ENST00000260595 FBLL1A6NHQ2 334 aaKnown RBP11.37□□□□□ -0.59
CGREF1-201ENST00000260595 K7EQM0 130 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 CXorf1O96002 111 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 CRYGDP07320 174 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 XGP55808 180 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
CGREF1-201ENST00000260595 PTH2Q96A98 100 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
CGREF1-201ENST00000260595 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
CGREF1-201ENST00000260595 TRBV6-4A0A1B0GX49 114 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 PGPEP1LA6NFU8 196 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 CIDEAO60543 219 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 RNASE3P12724 160 aaKnown RBP11.36□□□□□ -0.59
CGREF1-201ENST00000260595 KRTAP10-1P60331 282 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 PRNTQ86SH4 94 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 NHLRC2Q8NBF2 726 aa11.36□□□□□ -0.59
CGREF1-201ENST00000260595 IGHV3-38A0A0C4DH36 116 aa11.35□□□□□ -0.59
CGREF1-201ENST00000260595 GIPP09681 153 aaPredicted RBP11.35□□□□□ -0.59
CGREF1-201ENST00000260595 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
CGREF1-201ENST00000260595 LINC01556Q5JQF7 62 aa11.35□□□□□ -0.59
CGREF1-201ENST00000260595 ZNF506Q5JVG8 444 aa11.35□□□□□ -0.59
CGREF1-201ENST00000260595 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
CGREF1-201ENST00000260595 LINC00479Q96M42 142 aa11.35□□□□□ -0.59
CGREF1-201ENST00000260595 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
CGREF1-201ENST00000260595 A0A1W2PRE2 83 aa11.34□□□□□ -0.59
CGREF1-201ENST00000260595 PPT1P50897 306 aa11.34□□□□□ -0.59
CGREF1-201ENST00000260595 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
CGREF1-201ENST00000260595 PRADC1Q9BSG0 188 aa11.34□□□□□ -0.59
CGREF1-201ENST00000260595 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
CGREF1-201ENST00000260595 IBA57-AS1B1ANH7 110 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms