RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 IGKV3D-20A0A0C4DH25 116 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 C19orf71A6NCJ1 209 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 INS-IGF2F8WCM5 200 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV3-53P01767 116 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 DEFB131AP59861 70 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 DYNLRB2Q8TF09 96 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 RPL39LQ96EH5 51 aaKnown RBP6.92□□□□□ -1.3
CKAP2-201ENST00000258607 WFDC10AQ9H1F0 79 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 TRAV8-2A0A0B4J237 113 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 OOSP1A8MZH6 123 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 HOXD3P31249 432 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-201ENST00000258607 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 ZFP30Q9Y2G7 519 aa6.92□□□□□ -1.3
CKAP2-201ENST00000258607 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
CKAP2-201ENST00000258607 IGHV4-31P0DP07 118 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 CFHR3Q02985 330 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
CKAP2-201ENST00000258607 RAB37Q96AX2 223 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 DAZ1Q9NQZ3 744 aaKnown RBP6.91□□□□□ -1.3
CKAP2-201ENST00000258607 A0A087X0K7 114 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 FOSL1P15407 271 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 PLP1P60201 277 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 TCTEX1D4Q5JR98 221 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 SAPCD1Q5SSQ6 148 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 XCL2Q9UBD3 114 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
CKAP2-201ENST00000258607 HSBP1L1C9JCN9 74 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 BMI1P35226 326 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 LEPP41159 167 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 TMEM160Q9NX00 188 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 SIGLEC8Q9NYZ4 499 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
CKAP2-201ENST00000258607 A6NDX4 124 aa6.9□□□□□ -1.3
CKAP2-201ENST00000258607 IGLL1P15814 213 aa6.9□□□□□ -1.3
CKAP2-201ENST00000258607 ORMDL3Q8N138 153 aa6.9□□□□□ -1.3
CKAP2-201ENST00000258607 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
CKAP2-201ENST00000258607 TMEM14CQ9P0S9 112 aa6.9□□□□□ -1.3
CKAP2-201ENST00000258607 IGHG2P01859 326 aa6.9□□□□□ -1.31
CKAP2-201ENST00000258607 EBI3Q14213 229 aa6.9□□□□□ -1.31
CKAP2-201ENST00000258607 ZNF56Q15929 161 aa6.9□□□□□ -1.31
CKAP2-201ENST00000258607 PRSS22Q9GZN4 317 aa6.9□□□□□ -1.31
CKAP2-201ENST00000258607 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 RNF24Q9Y225 148 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
CKAP2-201ENST00000258607 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 A0A0G2JLM5 398 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 OR2K2Q8NGT1 345 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 FOXC2Q99958 501 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 MS4A6AQ9H2W1 248 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 MDFICQ9P1T7 246 aa6.89□□□□□ -1.31
CKAP2-201ENST00000258607 TRBV9A0A0B4J1U6 114 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 IGHV3-38A0A0C4DH36 116 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 IGKV3OR2-268A0A0C4DH90 116 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 NDUFS8O00217 210 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 P0DMU3 169 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 FAM231DQ6ZW35 169 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 TMEM158Q8WZ71 300 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 VPREB3Q9UKI3 123 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 NUDT3O95989 172 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
CKAP2-201ENST00000258607 IGHV7-4-1A0A0J9YVY3 117 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 PLA2G2AP14555 144 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 SLC25A16P16260 332 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 CR1P17927 2039 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 A0A1B0GXF2 115 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 J3QKU1 62 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 M0R143 59 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 PROK1P58294 105 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 Q0VG73 95 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 MPV17L2Q567V2 206 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 FAM104BQ5XKR9 115 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 GPHB5Q86YW7 130 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 TMEM61Q8N0U2 210 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
CKAP2-201ENST00000258607 NDUFAF3Q9BU61 184 aa6.87□□□□□ -1.31
CKAP2-201ENST00000258607 SYS1-DBNDD2H3BUS1 97 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 OR10J3Q5JRS4 329 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
CKAP2-201ENST00000258607 SLC50A1Q9BRV3 221 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 K7EP13 123 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 PDE6HQ13956 83 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
CKAP2-201ENST00000258607 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
CKAP2-201ENST00000258607 SMPXQ9UHP9 88 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms