RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TSSC4Q9Y5U2 329 aaPredicted RBP14.2□□□□□ -0.14
TRIM47-201ENST00000254816 TMSB15BA0A087X1C1 80 aa14.2□□□□□ -0.14
TRIM47-201ENST00000254816 PROK1P58294 105 aa14.2□□□□□ -0.14
TRIM47-201ENST00000254816 FAM162BQ5T6X4 162 aa14.2□□□□□ -0.14
TRIM47-201ENST00000254816 COX8CQ7Z4L0 72 aa14.2□□□□□ -0.14
TRIM47-201ENST00000254816 LOC102724200A0A096LPH7 203 aaPredicted RBP14.19□□□□□ -0.14
TRIM47-201ENST00000254816 SSTP61278 116 aa14.19□□□□□ -0.14
TRIM47-201ENST00000254816 PEMTQ9UBM1 199 aa14.19□□□□□ -0.14
TRIM47-201ENST00000254816 CCL24O00175 119 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 CRLF1O75462 422 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 ZNF688P0C7X2 276 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 HIST1H1AQ02539 215 aaPredicted RBP14.18□□□□□ -0.14
TRIM47-201ENST00000254816 EBLN2Q6P2I7 272 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 WFDC12Q8WWY7 111 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 A0A1B0GUT8 65 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 OVOL1O14753 267 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 ID1P41134 155 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 OR10J6PQ8NGY7 276 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 MIEN1Q9BRT3 115 aa14.18□□□□□ -0.14
TRIM47-201ENST00000254816 J3KRW8 73 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 CSN3P07498 182 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 SPATA45Q537H7 98 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 K7EQG2 157 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 LBHQ53QV2 105 aaPredicted RBP14.17□□□□□ -0.14
TRIM47-201ENST00000254816 Q6ZQT7 251 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 OR8A1Q8NGG7 326 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 SORL1Q92673 2214 aa14.17□□□□□ -0.14
TRIM47-201ENST00000254816 TMEM189A5PLL7 270 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 KRTAP10-3P60369 221 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 FHL3Q13643 280 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 MAJINQ3KP22 176 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 PSMG4Q5JS54 123 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 BAHCC1Q9P281 2608 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 PRR9Q5T870 116 aa14.16□□□□□ -0.14
TRIM47-201ENST00000254816 AGRNO00468 2067 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 M0R143 59 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 RAB4AP20338 218 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 CTRLP40313 264 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 NSUN5P1Q3KNT7 163 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 MUC21A0A0G2JKD1 596 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 MUC21A0A140T8X8 626 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 RIGQ13278 110 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 MUC21Q5SSG8 566 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 SPATA12Q7Z6I5 190 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 LINC00477Q96M19 166 aa14.15□□□□□ -0.14
TRIM47-201ENST00000254816 IGHV1-24A0A0C4DH33 117 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 CYSRT1A8MQ03 144 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 FABP5P3A8MUU1 101 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 LINC00173Q6ZV60 143 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 PPP1R14DQ9NXH3 145 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 F8P00451 2351 aa14.14□□□□□ -0.15
TRIM47-201ENST00000254816 ADARB2-AS1A8MUL3 147 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 ORM1P02763 201 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 SAMD13Q5VXD3 122 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 DYNLRB2Q8TF09 96 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
TRIM47-201ENST00000254816 LYZL1Q6UWQ5 148 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 ZNF575Q86XF7 245 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 TMEM61Q8N0U2 210 aa14.13□□□□□ -0.15
TRIM47-201ENST00000254816 SNRPD3P62318 126 aaKnown RBP14.12□□□□□ -0.15
TRIM47-201ENST00000254816 KIR3DS1Q14943 382 aa14.12□□□□□ -0.15
TRIM47-201ENST00000254816 C11orf21Q9P2W6 132 aa14.12□□□□□ -0.15
TRIM47-201ENST00000254816 C2CD3Q4AC94 2353 aa14.12□□□□□ -0.15
TRIM47-201ENST00000254816 LINC00614P0C842 121 aa14.12□□□□□ -0.15
TRIM47-201ENST00000254816 ZFAND2AQ8N6M9 145 aa14.11□□□□□ -0.15
TRIM47-201ENST00000254816 CHCHD1Q96BP2 118 aaKnown RBP14.11□□□□□ -0.15
TRIM47-201ENST00000254816 DEFB114Q30KQ6 69 aa14.11□□□□□ -0.15
TRIM47-201ENST00000254816 IGKV3-20P01619 116 aa14.1□□□□□ -0.15
TRIM47-201ENST00000254816 NUTF2P61970 127 aaKnown RBP14.1□□□□□ -0.15
TRIM47-201ENST00000254816 CD300EQ496F6 205 aaPredicted RBP14.1□□□□□ -0.15
TRIM47-201ENST00000254816 Q6AWC8 147 aa14.1□□□□□ -0.15
TRIM47-201ENST00000254816 FAM19A4Q96LR4 140 aa14.1□□□□□ -0.15
TRIM47-201ENST00000254816 TIMM8BQ9Y5J9 83 aaPredicted RBP14.1□□□□□ -0.15
TRIM47-201ENST00000254816 LENEPQ9Y5L5 61 aa14.1□□□□□ -0.15
TRIM47-201ENST00000254816 IGKV3D-20A0A0C4DH25 116 aa14.1□□□□□ -0.15
TRIM47-201ENST00000254816 BATFQ16520 125 aa14.09□□□□□ -0.15
TRIM47-201ENST00000254816 TMEM70Q9BUB7 260 aa14.09□□□□□ -0.15
TRIM47-201ENST00000254816 GATD1Q8NB37 220 aa14.08□□□□□ -0.15
TRIM47-201ENST00000254816 A0A0J9YX75 114 aa14.08□□□□□ -0.16
TRIM47-201ENST00000254816 LEPROTL1O95214 131 aa14.08□□□□□ -0.16
TRIM47-201ENST00000254816 IGLC3P0DOY3 106 aa14.08□□□□□ -0.16
TRIM47-201ENST00000254816 RNASE4P34096 147 aaKnown RBP14.08□□□□□ -0.16
TRIM47-201ENST00000254816 LINC01559Q495D7 138 aa14.08□□□□□ -0.16
TRIM47-201ENST00000254816 A0A1B0GW15 77 aa14.07□□□□□ -0.16
TRIM47-201ENST00000254816 ZNF124Q15973 351 aa14.07□□□□□ -0.16
TRIM47-201ENST00000254816 NIPBLQ6KC79 2804 aaeCLIP14.07□□□□□ -0.16
TRIM47-201ENST00000254816 AMN1Q8IY45 258 aa14.07□□□□□ -0.16
TRIM47-201ENST00000254816 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.07□□□□□ -0.16
TRIM47-201ENST00000254816 DEFB131AP59861 70 aa14.06□□□□□ -0.16
TRIM47-201ENST00000254816 RPS20P60866 119 aaKnown RBP14.06□□□□□ -0.16
TRIM47-201ENST00000254816 Q6ZN92 141 aa14.06□□□□□ -0.16
TRIM47-201ENST00000254816 FER1L6-AS1Q8NA97 138 aa14.06□□□□□ -0.16
TRIM47-201ENST00000254816 MCRIP2Q9BUT9 160 aaKnown RBP14.06□□□□□ -0.16
TRIM47-201ENST00000254816 UQCR10Q9UDW1 63 aa14.06□□□□□ -0.16
TRIM47-201ENST00000254816 KNCNA6PVL3 124 aa14.05□□□□□ -0.16
TRIM47-201ENST00000254816 D6R8Y8 96 aa14.05□□□□□ -0.16
TRIM47-201ENST00000254816 H0Y8G0 127 aa14.05□□□□□ -0.16
TRIM47-201ENST00000254816 IGLC6P0CF74 106 aa14.05□□□□□ -0.16
TRIM47-201ENST00000254816 ZNF493Q6ZR52 646 aa14.05□□□□□ -0.16
TRIM47-201ENST00000254816 TRAV9-2A0A087WT02 112 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms