RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 IGHV3-73A0A0B4J1V6 119 aa15.07■□□□□ 0
PPFIA1-201ENST00000253925 HIST1H4AP62805 103 aaKnown RBP15.07■□□□□ 0
PPFIA1-201ENST00000253925 TMEM141Q96I45 108 aa15.07■□□□□ 0
PPFIA1-201ENST00000253925 DKK2Q9UBU2 259 aa15.07■□□□□ 0
PPFIA1-201ENST00000253925 TRBV20-1A0A075B6N2 111 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 IGKV1D-37A0A075B6S9 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 IGHV7-81A0A0B4J1V7 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 TAX1BP3O14907 124 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 LINC01545Q5VT33 79 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 SH2D6Q7Z4S9 175 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE5Q13069 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE6Q13070 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 IGFBPL1Q8WX77 278 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 C1QTNF4Q9BXJ3 329 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE12JA6NER3 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE7O76087 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE12FP0CL80 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE12GP0CL81 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE12IP0CL82 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 GAGE4Q13068 117 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 UTF1Q5T230 341 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 LINC00173Q6ZV60 143 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 C20orf78Q9BR46 151 aa15.06■□□□□ 0
PPFIA1-201ENST00000253925 CTSGP08311 255 aa15.05■□□□□ 0
PPFIA1-201ENST00000253925 PRO3102Q9H379 93 aa15.05■□□□□ 0
PPFIA1-201ENST00000253925 PMVKQ15126 192 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 H3BMM0 161 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 IGLV2-8P01709 118 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 UBE2WQ96B02 151 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 HLA-DRB4P13762 266 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 MORN3Q6PF18 240 aaPredicted RBP15.05■□□□□ -0
PPFIA1-201ENST00000253925 HLA-DRB4X5D2U9 266 aa15.05■□□□□ -0
PPFIA1-201ENST00000253925 TRBV6-1A0A0K0K1D8 114 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 WI2-2373I1.2A0A1W2PRP0 233 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 RBMY1BA6NDE4 496 aaKnown RBP15.04■□□□□ -0
PPFIA1-201ENST00000253925 RBMY1EA6NEQ0 496 aaKnown RBP15.04■□□□□ -0
PPFIA1-201ENST00000253925 RBMY1DP0C7P1 496 aaKnown RBP15.04■□□□□ -0
PPFIA1-201ENST00000253925 RBMY1A1P0DJD3 496 aaKnown RBP15.04■□□□□ -0
PPFIA1-201ENST00000253925 RBMY1CP0DJD4 496 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 C1orf229Q6ZS94 237 aaPredicted RBP15.04■□□□□ -0
PPFIA1-201ENST00000253925 MUC6Q6W4X9 2439 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 DYSFO75923 2080 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 MYMXA0A1B0GTQ4 84 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 C19orf71A6NCJ1 209 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 SDHAF1A6NFY7 115 aa15.04■□□□□ -0
PPFIA1-201ENST00000253925 CENPVL3A0A0U1RRI6 287 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 RPL36AP83881 106 aaKnown RBP15.03■□□□□ -0
PPFIA1-201ENST00000253925 TAL2Q16559 108 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 RPL36ALQ969Q0 106 aaKnown RBP15.03■□□□□ -0
PPFIA1-201ENST00000253925 CMC4P56277 68 aaPredicted RBP15.03■□□□□ -0
PPFIA1-201ENST00000253925 CFHR4Q92496 578 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 H3BUA1 57 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 LY6G5BQ8NDX9 201 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 OTOGLQ3ZCN5 2332 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 PCP2Q8IVA1 136 aa15.03■□□□□ -0
PPFIA1-201ENST00000253925 TCF15Q12870 199 aa15.02■□□□□ -0
PPFIA1-201ENST00000253925 C11orf68Q9H3H3 251 aaKnown RBP15.02■□□□□ -0
PPFIA1-201ENST00000253925 C12orf74Q32Q52 190 aa15.02□□□□□ -0.01
PPFIA1-201ENST00000253925 SMIM20Q8N5G0 67 aa15.02□□□□□ -0.01
PPFIA1-201ENST00000253925 TRGV4A0A0C4DH28 118 aa15.02□□□□□ -0.01
PPFIA1-201ENST00000253925 IGHV7-4-1A0A0J9YVY3 117 aa15.02□□□□□ -0.01
PPFIA1-201ENST00000253925 A0A087WX48 190 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 SPINK13Q1W4C9 94 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 TIMM21Q9BVV7 248 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 INSP01308 110 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 DEFB131AP59861 70 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 IGHV1OR15-1A0A075B7D0 117 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 ADARB2-AS1A8MUL3 147 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 C11orf44Q8N8P7 122 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 SPG11Q96JI7 2443 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 PRADC1Q9BSG0 188 aa15.01□□□□□ -0.01
PPFIA1-201ENST00000253925 BUB3O43684 328 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 K7EMI3 77 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 FOXE3Q13461 319 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 A0A1B0GXF2 115 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 GAGE2AQ6NT46 116 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 SCRT2Q9NQ03 307 aa15□□□□□ -0.01
PPFIA1-201ENST00000253925 TRGV1A0A0A0MS02 117 aa14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 Q8N9W7 124 aa14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 SPXQ9BT56 116 aa14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 RHODO00212 210 aa14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 LGALS1P09382 135 aaKnown RBP14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 Q8N7P7 452 aa14.99□□□□□ -0.01
PPFIA1-201ENST00000253925 G3V4G9 280 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 ZNF493Q6ZR52 646 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 TNRC6AQ8NDV7 1962 aaKnown RBP14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 TRAV26-1A0A087WT03 109 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 ANKRD39Q53RE8 183 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 I3L3M4 83 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 RASL10AQ92737 203 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 MSRB1Q9NZV6 116 aa14.98□□□□□ -0.01
PPFIA1-201ENST00000253925 SLC25A20O43772 301 aa14.97□□□□□ -0.01
PPFIA1-201ENST00000253925 GATA1P15976 413 aaPredicted RBP14.97□□□□□ -0.01
PPFIA1-201ENST00000253925 KLHL30-AS1Q8NEE0 82 aa14.97□□□□□ -0.01
PPFIA1-201ENST00000253925 CHCHD5Q9BSY4 110 aa14.97□□□□□ -0.01
PPFIA1-201ENST00000253925 KLK9Q9UKQ9 250 aa14.97□□□□□ -0.01
PPFIA1-201ENST00000253925 MBD6Q96DN6 1003 aa14.96□□□□□ -0.01
PPFIA1-201ENST00000253925 ATG2AQ2TAZ0 1938 aa14.96□□□□□ -0.01
PPFIA1-201ENST00000253925 NEGR1Q7Z3B1 354 aa14.96□□□□□ -0.01
PPFIA1-201ENST00000253925 MLST8Q9BVC4 326 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms