RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 RNASE6Q93091 150 aaKnown RBP10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 USF3Q68DE3 2245 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 DKK1O94907 266 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 NXPH4O95158 308 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 IGFBPL1Q8WX77 278 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 IGKV1D-17A0A075B6S4 117 aa10.46□□□□□ -0.73
PCDHGA3-201ENST00000253812 RHOHQ15669 191 aa10.46□□□□□ -0.73
PCDHGA3-201ENST00000253812 PTH2Q96A98 100 aa10.46□□□□□ -0.73
PCDHGA3-201ENST00000253812 CRYGCP07315 174 aa10.46□□□□□ -0.74
PCDHGA3-201ENST00000253812 SPATA12Q7Z6I5 190 aa10.46□□□□□ -0.74
PCDHGA3-201ENST00000253812 CFHR4Q92496 578 aa10.46□□□□□ -0.74
PCDHGA3-201ENST00000253812 BUB1B-PAK6H3BSN5 160 aa10.46□□□□□ -0.74
PCDHGA3-201ENST00000253812 TICRRQ7Z2Z1 1910 aa10.46□□□□□ -0.74
PCDHGA3-201ENST00000253812 LMO1P25800 156 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 MUSTN1Q8IVN3 82 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 U3KQE9 123 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 MP68P56378 58 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 H3BRN7 92 aa10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
PCDHGA3-201ENST00000253812 MYLKQ15746 1914 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 VMO1Q7Z5L0 202 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 FAM223BA6NKX1 122 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 FAM223AQ8IWN6 122 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 GAFA1Q96PS6 74 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 TANC1Q9C0D5 1861 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 TMEM178BH3BS89 294 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 ASPHD1Q5U4P2 390 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 Q9H8V8 135 aa10.44□□□□□ -0.74
PCDHGA3-201ENST00000253812 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 HEATR5AQ86XA9 2040 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 THAP8Q8NA92 274 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
PCDHGA3-201ENST00000253812 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 LY6G6EA0A0G2JKS1 128 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 LYNX1G3V0Z9 82 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 LYNX1P0DP58 116 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 U3KQA8 63 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 E9PLD3 99 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 E9PLN8 166 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 THBDP07204 575 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 MSRB2Q9Y3D2 182 aa10.42□□□□□ -0.74
PCDHGA3-201ENST00000253812 DAD1P61803 113 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 FAM236DA0A1B0GTK5 79 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 FAM236CP0DP71 79 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 WT1-ASQ06250 92 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 DYNAPQ8N1N2 210 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 CCL19Q99731 98 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 C2orf70A6NJV1 201 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 PIFOQ8TCI5 191 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 GTSF1Q8WW33 167 aa10.41□□□□□ -0.74
PCDHGA3-201ENST00000253812 ZNF561-AS1K7EIQ3 104 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 LGALS9O00182 355 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 PRB1P04280 392 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 Q8N1Y9 231 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 MDS2Q8NDY4 140 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 TNRC6AQ8NDV7 1962 aaKnown RBP10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 A0A1W2PRX2 142 aa10.4□□□□□ -0.74
PCDHGA3-201ENST00000253812 C20orf197Q8N268 126 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 ZNRF2Q8NHG8 242 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 DOPEY1Q5JWR5 2465 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 OVOL3O00110 214 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 B3GALT5-AS1P59052 145 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
PCDHGA3-201ENST00000253812 ZNF672Q499Z4 452 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 NDUFC2-KCTD14E9PQ53 114 aa10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 H3BQ85 93 aa10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 FAM110DQ8TAY7 271 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 OPRPNQ99935 248 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 HELZP42694 1942 aaKnown RBP10.38□□□□□ -0.75
PCDHGA3-201ENST00000253812 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 WISP1O95388 367 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 ODF1Q14990 250 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 NREPQ16612 68 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 F5H768 121 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 PRB2P02812 416 aaPredicted RBP10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
PCDHGA3-201ENST00000253812 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms