RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RTL8CO15255 209 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 BCL2L11O43521 198 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 TYMSP04818 313 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 SPXQ9BT56 116 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 C11orf21Q9P2W6 132 aa15.93■□□□□ 0.14
LSM4-201ENST00000252816 GCGP01275 180 aa15.92■□□□□ 0.14
LSM4-201ENST00000252816 IFNA7P01567 189 aa15.92■□□□□ 0.14
LSM4-201ENST00000252816 ZNF471Q9BX82 626 aaPredicted RBP15.92■□□□□ 0.14
LSM4-201ENST00000252816 A0A096LPF7 62 aa15.91■□□□□ 0.14
LSM4-201ENST00000252816 KANTRA0A1W2PQU2 76 aa15.91■□□□□ 0.14
LSM4-201ENST00000252816 SEC11BP0C7V7 166 aa15.91■□□□□ 0.14
LSM4-201ENST00000252816 RASL10AQ92737 203 aa15.91■□□□□ 0.14
LSM4-201ENST00000252816 FBLL1A6NHQ2 334 aaKnown RBP15.9■□□□□ 0.14
LSM4-201ENST00000252816 PEX7O00628 323 aa15.9■□□□□ 0.14
LSM4-201ENST00000252816 FHL2Q14192 279 aa15.9■□□□□ 0.14
LSM4-201ENST00000252816 ESRGQ1W209 222 aa15.9■□□□□ 0.14
LSM4-201ENST00000252816 SMUG1Q53HV7 270 aa15.9■□□□□ 0.14
LSM4-201ENST00000252816 NKX6-2Q9C056 277 aaPredicted RBP15.9■□□□□ 0.14
LSM4-201ENST00000252816 SDF2L1Q9HCN8 221 aa15.9■□□□□ 0.14
LSM4-201ENST00000252816 PFN1P07737 140 aaKnown RBP15.89■□□□□ 0.13
LSM4-201ENST00000252816 SFTA3P0C7M3 94 aa15.89■□□□□ 0.13
LSM4-201ENST00000252816 LINC00336Q6ZUF6 198 aa15.89■□□□□ 0.13
LSM4-201ENST00000252816 TMUB2Q71RG4 321 aa15.89■□□□□ 0.13
LSM4-201ENST00000252816 KCNS1Q96KK3 526 aa15.89■□□□□ 0.13
LSM4-201ENST00000252816 M0R2P5 195 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 PAX4O43316 350 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 SAPCD1Q5SSQ6 148 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 STOML3Q8TAV4 291 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 FAM213BQ8TBF2 198 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 ZNF479Q96JC4 524 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 PRO0255Q9UI72 69 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 ARL2-SNX15V9GYD0 113 aa15.88■□□□□ 0.13
LSM4-201ENST00000252816 UMAD1C9J7I0 102 aa15.87■□□□□ 0.13
LSM4-201ENST00000252816 CRYBA4P53673 196 aa15.87■□□□□ 0.13
LSM4-201ENST00000252816 ZFP69Q49AA0 526 aa15.87■□□□□ 0.13
LSM4-201ENST00000252816 HIST1H2BAQ96A08 127 aa15.87■□□□□ 0.13
LSM4-201ENST00000252816 HHLA3Q9XRX5 114 aa15.87■□□□□ 0.13
LSM4-201ENST00000252816 NBDYA0A0U1RRE5 68 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 PFDN1O60925 122 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 PPT1P50897 306 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 Q6ZNX1 250 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 Q86TA4 180 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 SFT2D1Q8WV19 159 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 MBD3L1Q8WWY6 194 aa15.86■□□□□ 0.13
LSM4-201ENST00000252816 TRGV4A0A0C4DH28 118 aa15.85■□□□□ 0.13
LSM4-201ENST00000252816 SLAQ13239 276 aa15.85■□□□□ 0.13
LSM4-201ENST00000252816 CST9LP1Q5W188 147 aa15.85■□□□□ 0.13
LSM4-201ENST00000252816 Q9H8V8 135 aa15.85■□□□□ 0.13
LSM4-201ENST00000252816 TRAV4A0A0B4J268 109 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 A0A1B0GV50 99 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 A0A1B0GVY2 172 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 PRSS29PA6NIE9 313 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 C1orf134Q5TEV5 83 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 TCTE3Q8IZS6 198 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 UPK3BQ9BT76 320 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 MRPS16Q9Y3D3 137 aaKnown RBP15.84■□□□□ 0.13
LSM4-201ENST00000252816 ICOSQ9Y6W8 199 aa15.84■□□□□ 0.13
LSM4-201ENST00000252816 PAGE4O60829 102 aa15.83■□□□□ 0.12
LSM4-201ENST00000252816 EIF5AP63241 154 aaKnown RBP15.83■□□□□ 0.12
LSM4-201ENST00000252816 LGALSLQ3ZCW2 172 aaPredicted RBP15.83■□□□□ 0.12
LSM4-201ENST00000252816 DPPA3Q6W0C5 159 aa15.83■□□□□ 0.12
LSM4-201ENST00000252816 TPT1P13693 172 aaKnown RBP15.82■□□□□ 0.12
LSM4-201ENST00000252816 OR4C5Q8NGB2 326 aa15.82■□□□□ 0.12
LSM4-201ENST00000252816 C9orf85Q96MD7 179 aa15.82■□□□□ 0.12
LSM4-201ENST00000252816 IGKV3D-20A0A0C4DH25 116 aa15.81■□□□□ 0.12
LSM4-201ENST00000252816 RNASE3P12724 160 aaKnown RBP15.81■□□□□ 0.12
LSM4-201ENST00000252816 TCEAL7Q9BRU2 100 aa15.81■□□□□ 0.12
LSM4-201ENST00000252816 PKD1P98161 4303 aa15.81■□□□□ 0.12
LSM4-201ENST00000252816 FABP5P3A8MUU1 101 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 C9JCJ5 164 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 CRIP1P50238 77 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 SOHLH1Q5JUK2 328 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 ZC2HC1AQ96GY0 325 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 FMC1Q96HJ9 113 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 KRTAP1-5Q9BYS1 174 aa15.8■□□□□ 0.12
LSM4-201ENST00000252816 PKHD1P08F94 4074 aa15.79■□□□□ 0.12
LSM4-201ENST00000252816 H2AFB1P0C5Y9 115 aa15.79■□□□□ 0.12
LSM4-201ENST00000252816 MRPL23Q16540 153 aaKnown RBP15.79■□□□□ 0.12
LSM4-201ENST00000252816 ZNF876PQ49A33 203 aa15.79■□□□□ 0.12
LSM4-201ENST00000252816 COX8CQ7Z4L0 72 aa15.79■□□□□ 0.12
LSM4-201ENST00000252816 ZFP30Q9Y2G7 519 aa15.79■□□□□ 0.12
LSM4-201ENST00000252816 TRBV6-1A0A0K0K1D8 114 aa15.78■□□□□ 0.12
LSM4-201ENST00000252816 K7EQD1 137 aa15.78■□□□□ 0.12
LSM4-201ENST00000252816 UBE2G1P62253 170 aa15.78■□□□□ 0.12
LSM4-201ENST00000252816 PGPEP1LA6NFU8 196 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 LTAP01374 205 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 C1QBP02746 253 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 GYPEP15421 78 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 AKR1C3P42330 323 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 C6orf223Q8N319 242 aa15.77■□□□□ 0.12
LSM4-201ENST00000252816 SH2D1AO60880 128 aa15.76■□□□□ 0.11
LSM4-201ENST00000252816 ZNF506Q5JVG8 444 aa15.76■□□□□ 0.11
LSM4-201ENST00000252816 CFAP126Q5VTH2 177 aa15.76■□□□□ 0.11
LSM4-201ENST00000252816 LYPD5Q6UWN5 251 aa15.76■□□□□ 0.11
LSM4-201ENST00000252816 SCO2A0A1W2PP80 73 aa15.75■□□□□ 0.11
LSM4-201ENST00000252816 RS1O15537 224 aa15.75■□□□□ 0.11
LSM4-201ENST00000252816 ORM1P02763 201 aa15.75■□□□□ 0.11
LSM4-201ENST00000252816 GATA1P15976 413 aaPredicted RBP15.75■□□□□ 0.11
LSM4-201ENST00000252816 CCL20P78556 96 aa15.75■□□□□ 0.11
LSM4-201ENST00000252816 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms