RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 HSPB8Q9UJY1 196 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 PAM16Q9Y3D7 125 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 CSN3P07498 182 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 EDN2P20800 178 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 SSTP61278 116 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 SMIM15Q7Z3B0 74 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 KLHDC1Q8N7A1 406 aa17.22■□□□□ 0.35
HOXD9-201ENST00000249499 SNRPD3P62318 126 aaKnown RBP17.21■□□□□ 0.35
HOXD9-201ENST00000249499 LBHQ53QV2 105 aaPredicted RBP17.21■□□□□ 0.35
HOXD9-201ENST00000249499 MSRB1Q9NZV6 116 aa17.21■□□□□ 0.35
HOXD9-201ENST00000249499 TDRG1Q3Y452 100 aa17.2■□□□□ 0.34
HOXD9-201ENST00000249499 KLLNB2CW77 178 aa17.2■□□□□ 0.34
HOXD9-201ENST00000249499 K7EQG2 157 aa17.2■□□□□ 0.34
HOXD9-201ENST00000249499 OR10AG1Q8NH19 301 aa17.2■□□□□ 0.34
HOXD9-201ENST00000249499 SIGLEC8Q9NYZ4 499 aa17.2■□□□□ 0.34
HOXD9-201ENST00000249499 FLNAP21333 2647 aaKnown RBP17.19■□□□□ 0.34
HOXD9-201ENST00000249499 F6UB75 175 aa17.19■□□□□ 0.34
HOXD9-201ENST00000249499 SRD5A1P18405 259 aa17.19■□□□□ 0.34
HOXD9-201ENST00000249499 C4orf3Q8WVX3 66 aa17.19■□□□□ 0.34
HOXD9-201ENST00000249499 WFDC12Q8WWY7 111 aa17.19■□□□□ 0.34
HOXD9-201ENST00000249499 TCF21O43680 179 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 CD5LO43866 347 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 MIEN1Q9BRT3 115 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 HIVEP1P15822 2718 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 C20orf202A1L168 122 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 IFI27P40305 119 aaPredicted RBP17.18■□□□□ 0.34
HOXD9-201ENST00000249499 ACANP16112 2415 aa17.18■□□□□ 0.34
HOXD9-201ENST00000249499 SYS1-DBNDD2H3BUS1 97 aa17.17■□□□□ 0.34
HOXD9-201ENST00000249499 ASIPP42127 132 aa17.17■□□□□ 0.34
HOXD9-201ENST00000249499 DUX5Q96PT3 197 aa17.17■□□□□ 0.34
HOXD9-201ENST00000249499 MAP1LC3CQ9BXW4 147 aa17.17■□□□□ 0.34
HOXD9-201ENST00000249499 LINC01619G3V211 115 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 NPYP01303 97 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 DEFB1P60022 68 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 SPANXN1Q5VSR9 72 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 PET117Q6UWS5 81 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 LINC01546A6NGU7 62 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 RNASE4P34096 147 aaKnown RBP17.16■□□□□ 0.34
HOXD9-201ENST00000249499 SPATA45Q537H7 98 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 Q6ZQT7 251 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 WFDC3Q8IUB2 231 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 MAP1LC3AQ9H492 121 aa17.16■□□□□ 0.34
HOXD9-201ENST00000249499 MXRA5Q9NR99 2828 aa17.15■□□□□ 0.34
HOXD9-201ENST00000249499 DNAJC9-AS1A6NH13 148 aa17.15■□□□□ 0.34
HOXD9-201ENST00000249499 LEPP41159 167 aa17.15■□□□□ 0.34
HOXD9-201ENST00000249499 KRTAP1-1Q07627 177 aa17.15■□□□□ 0.34
HOXD9-201ENST00000249499 MRPL52Q86TS9 123 aaKnown RBP17.15■□□□□ 0.34
HOXD9-201ENST00000249499 SCRT2Q9NQ03 307 aa17.15■□□□□ 0.34
HOXD9-201ENST00000249499 H3BVH4 76 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 ANXA2RQ3ZCQ2 193 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 Q6ZSV7 163 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 DEFB125Q8N687 156 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 PEMTQ9UBM1 199 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 TRAV2A0A0B4J234 112 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 A0A0J9YX75 114 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 SPATA12Q7Z6I5 190 aa17.14■□□□□ 0.33
HOXD9-201ENST00000249499 LOC389332A0A1B0GUA5 103 aa17.13■□□□□ 0.33
HOXD9-201ENST00000249499 J3KRW8 73 aa17.13■□□□□ 0.33
HOXD9-201ENST00000249499 S100A4P26447 101 aaKnown RBP17.13■□□□□ 0.33
HOXD9-201ENST00000249499 SCGB2A2Q13296 93 aa17.13■□□□□ 0.33
HOXD9-201ENST00000249499 PSMG4Q5JS54 123 aa17.13■□□□□ 0.33
HOXD9-201ENST00000249499 NXT2Q9NPJ8 142 aaKnown RBP17.13■□□□□ 0.33
HOXD9-201ENST00000249499 F8P00451 2351 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 TRAV9-2A0A087WT02 112 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 PRSS47A8MTI9 375 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 SMKR1H3BMG3 65 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 DUSP14O95147 198 aaKnown RBP17.12■□□□□ 0.33
HOXD9-201ENST00000249499 ZNF688P0C7X2 276 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 EVI2AP22794 236 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 TCTEX1D4Q5JR98 221 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 ZNF747Q9BV97 191 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 TNFRSF6BO95407 300 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 NCR2O95944 276 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 ZNF705AQ6ZN79 300 aaPredicted RBP17.12■□□□□ 0.33
HOXD9-201ENST00000249499 LINC00173Q6ZV60 143 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 DPF1Q92782 380 aa17.12■□□□□ 0.33
HOXD9-201ENST00000249499 MRAP2Q96G30 205 aa17.11■□□□□ 0.33
HOXD9-201ENST00000249499 C2orf88Q9BSF0 95 aa17.11■□□□□ 0.33
HOXD9-201ENST00000249499 HBDP02042 147 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 TFPI2P48307 235 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 FOXI2Q6ZQN5 318 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 OR11H1Q8NG94 326 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 OR1N2Q8NGR9 330 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 SELENOKQ9Y6D0 94 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 A0A096LNJ9 63 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 TSPOP30536 169 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 SLURP1P55000 103 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 ADAMTSL5Q6ZMM2 481 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 UQCR10Q9UDW1 63 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 PHLDA3Q9Y5J5 127 aa17.1■□□□□ 0.33
HOXD9-201ENST00000249499 C7orf71A4D174 169 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 M0R143 59 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 NXPH4O95158 308 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 FAM159AQ6UWV7 190 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 C18orf65Q6ZTR6 163 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 OR9G4Q8NGQ1 327 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 TLN2Q9Y4G6 2542 aa17.09■□□□□ 0.33
HOXD9-201ENST00000249499 TEP1Q99973 2627 aaKnown RBP17.08■□□□□ 0.33
HOXD9-201ENST00000249499 OR4C46A6NHA9 309 aa17.08■□□□□ 0.33
HOXD9-201ENST00000249499 KIR3DS1Q14943 382 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms