RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 Q6AWC8 147 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 ZNF575Q86XF7 245 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
LRFN1-201ENST00000248668 JMJD8Q96S16 334 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 FAM223BA6NKX1 122 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 TMEM78Q5T7P6 136 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 FAM223AQ8IWN6 122 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 TSSC4Q9Y5U2 329 aaPredicted RBP12.05□□□□□ -0.48
LRFN1-201ENST00000248668 CD5LO43866 347 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 MRPL51Q4U2R6 128 aaKnown RBP12.05□□□□□ -0.48
LRFN1-201ENST00000248668 OR4X2Q8NGF9 303 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 C20orf173Q96LM9 149 aa12.05□□□□□ -0.48
LRFN1-201ENST00000248668 FAM104BQ5XKR9 115 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 GLMPQ8WWB7 406 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 TGFAP01135 160 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 IGHG2P01859 326 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 PRSS57Q6UWY2 283 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 MTURNQ8N3F0 131 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 TEX48A0A1B0GUV7 120 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 TMEM8BA6NDV4 472 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 SYS1-DBNDD2H3BUS1 97 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
LRFN1-201ENST00000248668 CKS2P33552 79 aa12.03□□□□□ -0.48
LRFN1-201ENST00000248668 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
LRFN1-201ENST00000248668 F6UB75 175 aa12.03□□□□□ -0.48
LRFN1-201ENST00000248668 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
LRFN1-201ENST00000248668 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
LRFN1-201ENST00000248668 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.48
LRFN1-201ENST00000248668 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.48
LRFN1-201ENST00000248668 KLK9Q2XQG4 91 aa12.02□□□□□ -0.48
LRFN1-201ENST00000248668 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.48
LRFN1-201ENST00000248668 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.48
LRFN1-201ENST00000248668 EVI2AP22794 236 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 KRTAP10-9P60411 292 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 OR2K2Q8NGT1 345 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 A0A1B0GW15 77 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 NPYP01303 97 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 OR5AL1P0C617 328 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 IGLC6P0CF74 106 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
LRFN1-201ENST00000248668 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 SPCS1Q9Y6A9 102 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 U3KQE9 123 aa12.02□□□□□ -0.49
LRFN1-201ENST00000248668 PRR9Q5T870 116 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 CHD6Q8TD26 2715 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 COX6B1P14854 86 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 OR10AG1Q8NH19 301 aa12.01□□□□□ -0.49
LRFN1-201ENST00000248668 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
LRFN1-201ENST00000248668 A6NJY4 79 aa12□□□□□ -0.49
LRFN1-201ENST00000248668 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
LRFN1-201ENST00000248668 GPHB5Q86YW7 130 aa12□□□□□ -0.49
LRFN1-201ENST00000248668 NPFFR1Q9GZQ6 430 aa12□□□□□ -0.49
LRFN1-201ENST00000248668 SCRT2Q9NQ03 307 aa12□□□□□ -0.49
LRFN1-201ENST00000248668 ZNF469Q96JG9 3925 aaPredicted RBP12□□□□□ -0.49
LRFN1-201ENST00000248668 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRFN1-201ENST00000248668 KIR3DS1Q14943 382 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 DUX5Q96PT3 197 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 UFC1Q9Y3C8 167 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 HSD52Q0P140 79 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
LRFN1-201ENST00000248668 CRIP2P52943 208 aaPredicted RBP11.99□□□□□ -0.49
LRFN1-201ENST00000248668 HIST1H1AQ02539 215 aaPredicted RBP11.99□□□□□ -0.49
LRFN1-201ENST00000248668 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 TMEM191AQ9H0A3 160 aa11.99□□□□□ -0.49
LRFN1-201ENST00000248668 NDUFA4O00483 81 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 GEMIN7Q9H840 131 aaKnown RBP11.98□□□□□ -0.49
LRFN1-201ENST00000248668 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 RBAKDNA6NC62 111 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 C2orf91Q6ZV80 131 aa11.98□□□□□ -0.49
LRFN1-201ENST00000248668 A0A096LNJ9 63 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 H3BVH4 76 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 TMEM97Q5BJF2 176 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 LINC01356Q8N9X3 169 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 HIVEP2P31629 2446 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 RNF185Q96GF1 192 aa11.97□□□□□ -0.49
LRFN1-201ENST00000248668 C18orf15Q96N68 181 aa11.96□□□□□ -0.49
LRFN1-201ENST00000248668 ZNF747Q9BV97 191 aa11.96□□□□□ -0.49
LRFN1-201ENST00000248668 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.49
LRFN1-201ENST00000248668 ZNF843Q8N446 348 aa11.96□□□□□ -0.49
LRFN1-201ENST00000248668 APCP25054 2843 aa11.96□□□□□ -0.5
LRFN1-201ENST00000248668 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms