RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LINC01356Q8N9X3 169 aa16.65■□□□□ 0.26
RNF39-201ENST00000244360 ZMAT4Q9H898 229 aa16.65■□□□□ 0.26
RNF39-201ENST00000244360 SMPXQ9UHP9 88 aa16.65■□□□□ 0.26
RNF39-201ENST00000244360 TRAV8-6A0A0B4J262 113 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 FOXE3Q13461 319 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 AP1S3Q96PC3 154 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 ZFHX3Q15911 3703 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 MYO18BQ8IUG5 2567 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 PRSS47A8MTI9 375 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 ADAMTSL5Q6ZMM2 481 aa16.64■□□□□ 0.25
RNF39-201ENST00000244360 IGHV7-4-1A0A0J9YVY3 117 aa16.63■□□□□ 0.25
RNF39-201ENST00000244360 ATP5LO75964 103 aa16.63■□□□□ 0.25
RNF39-201ENST00000244360 PCP4P48539 62 aa16.63■□□□□ 0.25
RNF39-201ENST00000244360 DKK2Q9UBU2 259 aa16.63■□□□□ 0.25
RNF39-201ENST00000244360 C9orf118A6NHY6 69 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 J3QLI3 93 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 NMUP48645 174 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 LINC00477Q96M19 166 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 CST9LQ9H4G1 147 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 USP24Q9UPU5 2620 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 OVOL1O14753 267 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 ODF1Q14990 250 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 GTF2H5Q6ZYL4 71 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 C18orf15Q96N68 181 aa16.62■□□□□ 0.25
RNF39-201ENST00000244360 CELSR2Q9HCU4 2923 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 IGHV4-4A0A075B6R2 117 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 LCNL1Q6ZST4 164 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 OR2K2Q8NGT1 345 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 PRB1P04280 392 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 DEFB112Q30KQ8 113 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 PRR9Q5T870 116 aa16.61■□□□□ 0.25
RNF39-201ENST00000244360 EVI2AP22794 236 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 IGLV2-18A0A075B6J9 118 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 GAS8-AS1O95177 125 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 IGHV4-59P01825 116 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 PRSS1P07477 247 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 COX6B1P14854 86 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 WFDC3Q8IUB2 231 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 ZFAND2AQ8N6M9 145 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 DAZ1Q9NQZ3 744 aaKnown RBP16.6■□□□□ 0.25
RNF39-201ENST00000244360 HIGD1BQ9P298 99 aa16.6■□□□□ 0.25
RNF39-201ENST00000244360 GAGE10A6NGK3 116 aa16.59■□□□□ 0.25
RNF39-201ENST00000244360 IGKCP01834 107 aa16.59■□□□□ 0.25
RNF39-201ENST00000244360 OR10J6PQ8NGY7 276 aa16.59■□□□□ 0.25
RNF39-201ENST00000244360 HLA-DRB4P13762 266 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 PSMB8P28062 276 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 KIR3DS1Q14943 382 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 OCIAD2Q56VL3 154 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 Q6ZQT7 251 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 PCP2Q8IVA1 136 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 TMEM158Q8WZ71 300 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 BBC3Q96PG8 261 aaPredicted RBP16.58■□□□□ 0.25
RNF39-201ENST00000244360 RHPN1-AS1Q9BWJ2 59 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 HLA-DRB4X5D2U9 266 aa16.58■□□□□ 0.25
RNF39-201ENST00000244360 GAGE12BA1L429 117 aa16.58■□□□□ 0.24
RNF39-201ENST00000244360 K7EMT4 169 aa16.58■□□□□ 0.24
RNF39-201ENST00000244360 FAM19A4Q96LR4 140 aa16.58■□□□□ 0.24
RNF39-201ENST00000244360 TMEM95Q3KNT9 176 aa16.57■□□□□ 0.24
RNF39-201ENST00000244360 TM4SF20Q53R12 229 aa16.57■□□□□ 0.24
RNF39-201ENST00000244360 DPM2O94777 84 aa16.57■□□□□ 0.24
RNF39-201ENST00000244360 SRSF1Q07955 248 aaKnown RBP eCLIP16.57■□□□□ 0.24
RNF39-201ENST00000244360 HHLA3Q9XRX5 114 aa16.57■□□□□ 0.24
RNF39-201ENST00000244360 TMEM89A2RUT3 159 aa16.56■□□□□ 0.24
RNF39-201ENST00000244360 GATA1P15976 413 aaPredicted RBP16.56■□□□□ 0.24
RNF39-201ENST00000244360 LAGE3Q14657 143 aa16.56■□□□□ 0.24
RNF39-201ENST00000244360 UFSP1Q6NVU6 142 aa16.56■□□□□ 0.24
RNF39-201ENST00000244360 NRACQ8N912 160 aa16.56■□□□□ 0.24
RNF39-201ENST00000244360 MRAP2Q96G30 205 aa16.56■□□□□ 0.24
RNF39-201ENST00000244360 SPANXN1Q5VSR9 72 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 APRG1Q8IVJ8 170 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 FOXC2Q99958 501 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 UTP20O75691 2785 aaKnown RBP16.55■□□□□ 0.24
RNF39-201ENST00000244360 TRBV7-9A0A0J9YWB2 115 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 TCTAP57738 103 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 MYOZ3Q8TDC0 251 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 ZNF462Q96JM2 2506 aa16.55■□□□□ 0.24
RNF39-201ENST00000244360 FSHBP01225 129 aa16.54■□□□□ 0.24
RNF39-201ENST00000244360 SMIM17P0DL12 118 aa16.54■□□□□ 0.24
RNF39-201ENST00000244360 UFC1Q9Y3C8 167 aa16.54■□□□□ 0.24
RNF39-201ENST00000244360 K7EP34 96 aa16.54■□□□□ 0.24
RNF39-201ENST00000244360 CSPG4Q6UVK1 2322 aa16.54■□□□□ 0.24
RNF39-201ENST00000244360 ZFYVE26Q68DK2 2539 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 TRAV21A0A0B4J279 112 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 TGFAP01135 160 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 ZNF843Q8N446 348 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 MAP1AP78559 2803 aaPredicted RBP16.53■□□□□ 0.24
RNF39-201ENST00000244360 CRYBG3Q68DQ2 2970 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 FBN2P35556 2912 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 H3BUT2 72 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 K7ERU9 68 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 RPL11P62913 178 aaKnown RBP16.53■□□□□ 0.24
RNF39-201ENST00000244360 RNF151Q2KHN1 245 aa16.53■□□□□ 0.24
RNF39-201ENST00000244360 UBR5O95071 2799 aaPredicted RBP16.52■□□□□ 0.24
RNF39-201ENST00000244360 DEFB1P60022 68 aa16.52■□□□□ 0.24
RNF39-201ENST00000244360 H3BVH4 76 aa16.51■□□□□ 0.23
RNF39-201ENST00000244360 JMJD8Q96S16 334 aa16.51■□□□□ 0.23
RNF39-201ENST00000244360 SAMD13Q5VXD3 122 aa16.51■□□□□ 0.23
RNF39-201ENST00000244360 IGKV2D-26A0A0A0MRZ7 120 aa16.5■□□□□ 0.23
RNF39-201ENST00000244360 OR5A1Q8NGJ0 315 aa16.5■□□□□ 0.23
RNF39-201ENST00000244360 ANKRD17O75179 2603 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms